Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04396 ATGGCAAGAATGGTGGCACTCCAACAGAATCAACTATCTTTCCCTCCTTTagcttcttctctttcttctgaTTTCACTGGAACAAGACTTCAAACTCATATTCAGttgaaaagaaaaacatggcAGTCAAAAGGGGCTTTATGTGTAACAGCATCAAGCACAAAGAAAATCCTCATAATGGGAGGTACTAGGTTCATTGGTGTGTTTTTGTCTAGGCAACTTATCAAAGAAGGTCATCAGGTAACTTTATTTACAAGAGGAAAAGCACCTATCACTCAACAATTGCCAGGTGAATCAGACACtgatttttctgatttttcttcCAAGaTCTTGCATTTGAAGGGAGACAGGAAGGACTATGATTTTGTCAAATCTAGTCTCTCAGCAGAAGGATTTGATGTTGTTTATGACATTAATGGACGAGAGGCAGAAGAAGTTGAGCCAATATTGGATGCTCTCCCTAATCTAGAACAGTTCATTTACTGCTCTTCTGCTGGTGTCTATCTCAAATCTGATTTGTTACCTCACGCCGAGGTTGATGCAGTTGATCCTAAGAGCAGGCACAAGGGAAAGCTTGAAACTGAGAGCTTGTTGCAATCAAAGGATGTTAACTGGACTTCAATAAGGCCAGTTTATATCTATGGACCTTTGAATTACAACCCTGTTGAAGAATGGTTCTTCCACAGATTGAAAGCCGGTCGCCCGATTCCTATTCCCGGCTCAGGAATACAGATAACACAACTTGGCCATGTTAAGGATTTGGCAACAGCATTTCTGAAGGTTCTTGGAAATGATAAGGCCAGCAAGCAGATATTCAACATCTCCGGAGACAAATATGTCACATTTGACGGATTAGCAAAAGCATGTGCTAAGGCTGGTGGGTTCCCTGAGCCAGAGATCGTTCATTACAACCCTAAAGACTTCGATTTCGGGaaaaagaagtcatttccaTTCCGCGACCAGCATTTCTTTGCATCAGTGGAGAAGGCAAAGAGTGTGCTTGGGTTGGAACCTGATTTTGGGCTTGTAGAAGGTCTTACAGATTCGTATAACTTGGACTTCGGTAGAGGAACTTTCCGCAAAGAGGCTGATTTTTCAACAGATGATATAATTCTTGGCAAGAGTCTTGTTAATGTATGA 1140 0.3921 MARMVALQQNQLSFPPLASSLSSDFTGTRLQTHIQLKRKTWQSKGALCVTASSTKKILIMGGTRFIGVFLSRQLIKEGHQVTLFTRGKAPITQQLPGESDTDFSDFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAFLKVLGNDKASKQIFNISGDKYVTFDGLAKACAKAGGFPEPEIVHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPDFGLVEGLTDSYNLDFGRGTFRKEADFSTDDIILGKSLVNV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04396 379 Gene3D - 52 352 - -
Tsu07g04396 379 Pfam NAD dependent epimerase/dehydratase family 57 274 IPR001509 -
Tsu07g04396 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 348 IPR036291 -
Tsu07g04396 379 PANTHER CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC 35 374 - -
Tsu07g04396 379 CDD SDR_a1 55 308 - -
Tsu07g04396 379 PANTHER UDP-GLUCOSE 4-EPIMERASE 35 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04396 Tsu-Chr7 49164332 49167682 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04396 - - lja:Lj1g3v4790750.1 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04396 07 49164332 49167682 Tsu07g04396 07 49164332 49167682 ECH