Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04392 ATGTCTGGATCCTCATTCACAAATGGTGCAAACTTTGCAGTGGTAGGATCCTCTACCCTTCCAAAATATGTTCCTTTCTCTTTAAATATTCAGGTGATGCAGTTCCAACATTTCAAAGCTCGTAGCCTCGAACTTGCTACCTCAGGTGCAAAAAATGCGATCAACGACGCAGGCTTCCGAGATGCACTCTACTTGATTGATATTGGGCAAAATGACCTTGCTGATTCATTTACCAAAGGTCTATCATATGTGCAAGTCACCAAGAGGATCCCAACAGTTATCACTGAAATTGAGAATGCTGTTAAGAGTTTGTATAATGAAGGTGGCAGGAAATTTTGGATTCACAATACCGGGCCCTTTGGCTGTCTTCCTAAATTAATCGTACTGTCTCAGAAGAAAGATCTCGATTCATTTGGTTGTCTTTCTAGTTACAATTCTGCTGCAAAATTGTTTAACGAAGCATTGTATCATTCAAGCCAGAGACTAAGAACTGAATTGAAGGATGCTACCATAGTCTATGTTGATATTTATGCCATTAAGAATGACCTCGTCACAAATGCCACCAAATATGGTTTCTCAAATCCATTGATGGTATGCTGCGGCTATGGAGGTCCTCCTTATAATTTCGATGTAAGAGTAACATGCGGTCAACCTGGTTATCAAGTTTGTGATGAAGGATCTAAGCATGTGAGTTGGGATGGAATCCATTATACAGAGGCTGCAAATACATGGATATCTTCTAGGATACTTTCGACAGCATATTCCACACCACGGACACCTTTTGGTTTTTTCTGCCGCAACTGA 804 0.4055 MSGSSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFQHFKARSLELATSGAKNAINDAGFRDALYLIDIGQNDLADSFTKGLSYVQVTKRIPTVITEIENAVKSLYNEGGRKFWIHNTGPFGCLPKLIVLSQKKDLDSFGCLSSYNSAAKLFNEALYHSSQRLRTELKDATIVYVDIYAIKNDLVTNATKYGFSNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGSKHVSWDGIHYTEAANTWISSRILSTAYSTPRTPFGFFCRN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04392 267 PANTHER OS01G0329900 PROTEIN 4 266 - -
Tsu07g04392 267 SUPERFAMILY SGNH hydrolase 43 251 - -
Tsu07g04392 267 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 4 266 - -
Tsu07g04392 267 Pfam GDSL-like Lipase/Acylhydrolase 4 249 IPR001087 GO:0016788
Tsu07g04392 267 Gene3D SGNH hydrolase 1 255 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04392 Tsu-Chr7 49137933 49140335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04392 9 249 Acyl Lipid Metabolism Gene Families AT4G10950 24.696 1.48e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04392 - - gsj:114407527 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04392 07 49137933 49140335 Tsu07g04392 07 49137933 49140335 ECH