Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04387 ATGGGGTTCCAAAACTtgggttttttaatttttattgtgaCAATATTGAATGTGCTACTTGTTGGTCAATTTGTGAATTCCAAGCGTGTTAATGGTAATCATCATCGTTATCATCGTCAACATACCTCACACGCTCGATTAGTTAATAGTAAAACACTCTACGAAAATGGTTTCGTTCAACGAAATGGAACTCATTTTGTTACGAACGGAAAACCATTGTACTTAAACGGTttcaattcatattttttaatgaacgTAGCATCAGATCCATCTACAATGTCCAAAGTTACTACAACATTTCAACAAGCCTCTCAAAATGGTTTGAACTTAGCAAGAACATGGGCCTTTAATGATGGAGGTTATAAAGCCCTTCAAACTTCACCTGGTTCTTATGATGAGGATGTATTCAAGGGATTGGATTTTGTGATATCAGAAGCAGGGAAAAATGGAGTGCAACTCATATTAAGCTTGGTGAATAATTGGAATGATTATGGTGGGAAAAGTCAATATGTAAAATGGGCCAAAGAGAGGGGTCAATTAGTGAACAATGATGATGATTTCTTCTTGCACCCAGTAGTTAAACAATATTACAAAAACCATATTGCGGTTGTTTTGACTAGAAATAATACTATTACTGGATTGGCTTATAAGGATGATCCAACCATTTTTGCATGGGAGCTTATGAATGAACCTCGTTGTCAAAGTGACTCTTCCGGCAAATCAATTcagAGTTGGGTGACTGAAATGGCTCCCTATGTGAAGTCTATTGATAGCAACCATTTACTAGAAATTGGTCTTGAAGGATTTTATGGTGAAACAATGCCAGAAAAGAATCCTGGCTATCCAGTTGGAACAGATTTTATTTCCAATAATCAAGTTACCGAAATCGATTTCGCGACCATTCATCTCTACCCTGAAACATGGGTATCAAGCACAGATGAAACTGCTCAAGATACATTTGTTGACAAGTGGGTTCAAACCCATATTGAAGACtcaaatgacattttaaataaaCCAATTCTTATTACTGAATTTGGAAAGTCTTCAAAATATTCTGGATATAACGTGGATAAGAGGAATAGTTACTTTGAAAAGTTATACAATTTCGTGTACAATAGTGCTAGCAATGGAGGCCCATGTGCTGGTGGGCTTTTCTGGCAGTTCATGGCCCAAGGGTTGGATAGTTTTCGTGATGGCTATGAAGTCATACTTGAAGACAACTCTTCAACTGCTACGGTTATTAGTCAACAATCTATGAGAATGTCAAATCTTAAATAA 1278 0.3521 MGFQNLGFLIFIVTILNVLLVGQFVNSKRVNGNHHRYHRQHTSHARLVNSKTLYENGFVQRNGTHFVTNGKPLYLNGFNSYFLMNVASDPSTMSKVTTTFQQASQNGLNLARTWAFNDGGYKALQTSPGSYDEDVFKGLDFVISEAGKNGVQLILSLVNNWNDYGGKSQYVKWAKERGQLVNNDDDFFLHPVVKQYYKNHIAVVLTRNNTITGLAYKDDPTIFAWELMNEPRCQSDSSGKSIQSWVTEMAPYVKSIDSNHLLEIGLEGFYGETMPEKNPGYPVGTDFISNNQVTEIDFATIHLYPETWVSSTDETAQDTFVDKWVQTHIEDSNDILNKPILITEFGKSSKYSGYNVDKRNSYFEKLYNFVYNSASNGGPCAGGLFWQFMAQGLDSFRDGYEVILEDNSSTATVISQQSMRMSNLK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04387 425 PANTHER - 37 425 IPR045053 GO:0004553
Tsu07g04387 425 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 37 425 - -
Tsu07g04387 425 SUPERFAMILY (Trans)glycosidases 57 414 IPR017853 -
Tsu07g04387 425 Gene3D Glycosidases 54 425 - -
Tsu07g04387 425 Pfam Cellulase (glycosyl hydrolase family 5) 70 362 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04387 Tsu-Chr7 49111076 49113743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04387 55 425 Glycoside Hydrolase AT1G02310 55.643 1.05e-156 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04387 K19355 - gmx:100791612 634.409