Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04357 ATGCTGAGATTAAAAGCGTTTCGTCCTTCCACTGATAAAGTCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACTGCTGATGATTCAGATCGAGTTTCTGTTTGGAACTGGGAACATCGTCAGGTGATATATGAGTTGAAAGCTGGTGGAGTCGATGAACGGCGTTTAGTAGGTGCAAAATTGGAGAAGTTAGCCGAGGGAGAAACAGAGTCTAGAGGAAAACCGACAGAAGCCATTCGTGGAGGAAGTGTTAAGCAGGTGAatttttatgatgatgatgtacGCTTTTGGCAAAATTGGCATAATCGCTCTGCAGCGGCAGAGGCTCCGACAGCTGTCCATACTTCAGCTTTTAGTTCTCCTGCCCCATCAACAAAAGGGAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTAACAAAGCAAGAGCTCGAAAGCAAGTCGCTACACTGCATGGAATTCCTCTATAGATCTGGTGTTGGTGATGGTCCTCTTGTGGCTTTTGGTGCATCTGATGGAGTCATTAGAGTTCTTTCAATGATGACATGGAAGCTTGCGAGAAAATACACTGGAGGTCATAAAGGAACAATCTCTTGCTTGAGGTCCTTCATGGCAGCTTCCGGCGAGGCTCTTCTGGTTTCGGGTGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGATCATGGACAAACTGAACTTGTACCGAAGCTGAGTTTAAAAGCACATGATGGCGGTGTTGTGGCAGTTGAGCTGTCTAGAGTGATGGGAGGAGCTCCTCAGCTAATTACCATTGGCGTGGATAAGACATTAGCTATATGGGACACAGTCTCCTTTAAGGAGCTGCGGCGTATAAAACCTGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCAATCGAACATCCCACATATTCTGCTCTCACTAGGCCATTGTGTGAATTGACAACAGTTATTCCTCCACATGCTCTTGCTCCTAATAAGAAACTAAGGGTGTATTGTATGGTTGCACACTCTTTGCAGCCGCATCTTGTTGCTATTGGAACCAATATTGGTGTTGTTATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCCCTACCTACCCCATCAGATAGTAGAGAGCATTCTGCTGTATTTGTAATTGAAAGGGAGCTAAAGctattaaattttcaattaaacaaCTCTGTAAATCCATCCCTTGGAAGCTCCTTGGCAGAAACAGGCAGAACCCAGGGAGATTCTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCTCATGATTCATACTCGGTTCTTTCTGTGAGCAGTTCAGGAAAGTATTTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTCAGCGATTGGTCAATTGTTGACTCTGGCAGTGCAAGGCTTCTTGCTTGGGATACTTGTCGTGACAGATTTGCTATACTGGAATCATCATTACCTCCTCGAATTCCTATAATTCCCAAAGGTAGTTCATCAAAAAGAGCCAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCCGCAGCTGCTGCCGGTTCCGCAGCTTCTGTTCAAGTCCGAATCTTGTTAGATGACGGAACATCAAATATACTAATGAGGTCTGTTGGTGCACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGAACATCTAGGAGAATCAGTCCTATTGCTGCTACAGCTATTTCGACAATCCAGTCTATGCCATTATCCGGTTATGGAAGCAGCGGTCTTTCTTCTTTTACCACTTATGATGATGGATTTTCTTCACATAGATCTCCAACGGAGGCGGCACCTCAAAACTTCCAGTTATACAGTTGGGAGACATTTCAACCTGTGGGTGGTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCATCGAGTATTGTGCATTTGCATATCAACAATACATAGTCATATCTTCTTTGCGCCCACAATATAGATACTTGGGAGATGTTTCAATTCCATATGCTACCAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCAACACCGACTACTATAGAAGTTGTTTTTGTGGACGCTGGGGTTACACAAATTGAcattgaaactaaaaaaatgaaagaagagcAGAAATTGAGAGAAGCACAATCAAGAGCTGTAGCAGAGCATGGAGAGTTAGCACTAATTACAGTTGAAGGCCCCCAGTCTACTACAGAAGAAAGAATATCATTGAGACCACCAATGCTGCAGGTGGTTCGATTAGCTTCATTTCAGCATGCTCCTTCGGTGCCACCTTTCCTATCGTTACCAAAACAATCTAGAGTTGATGGTGATGAAGCAGATGAGAGAAAGGCAAGTGAAGTAGCAGTGGGTGGAGGTGGTGTGTCTGTGGCAGTTACTCGTTTTCCAACGGAGCAGAAACGTCCAGTTGGGCCTCTTGTTGTGGTGGGTGTCAAGGATGGAGTTCTGTGGCTAATTGACAGGTACATGCGAGCTCACGCATTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGCGACGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTGTGTTGCATGCATATAG 2847 0.4426 MLRLKAFRPSTDKVVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESRGKPTEAIRGGSVKQVNFYDDDVRFWQNWHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVTKQELESKSLHCMEFLYRSGVGDGPLVAFGASDGVIRVLSMMTWKLARKYTGGHKGTISCLRSFMAASGEALLVSGASDGLLIIWSADHGQTELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGVDKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPHALAPNKKLRVYCMVAHSLQPHLVAIGTNIGVVICEFDARSLPPVAPLPTPSDSREHSAVFVIERELKLLNFQLNNSVNPSLGSSLAETGRTQGDSFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSAASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGFSSHRSPTEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTIEYCAFAYQQYIVISSLRPQYRYLGDVSIPYATSAVWHRRQLFVATPTTIEVVFVDAGVTQIDIETKKMKEEQKLREAQSRAVAEHGELALITVEGPQSTTEERISLRPPMLQVVRLASFQHAPSVPPFLSLPKQSRVDGDEADERKASEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVKDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRCVACI 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04357 948 SMART WD40_4 248 290 IPR001680 GO:0005515
Tsu07g04357 948 SMART WD40_4 1 39 IPR001680 GO:0005515
Tsu07g04357 948 SMART WD40_4 198 241 IPR001680 GO:0005515
Tsu07g04357 948 PANTHER TSET COMPLEX MEMBER TSTF 1 943 - -
Tsu07g04357 948 MobiDBLite consensus disorder prediction 440 467 - -
Tsu07g04357 948 SUPERFAMILY WD40 repeat-like 8 493 IPR036322 GO:0005515
Tsu07g04357 948 ProSiteProfiles Trp-Asp (WD) repeats profile. 255 299 IPR001680 GO:0005515
Tsu07g04357 948 Gene3D - 3 346 IPR015943 GO:0005515
Tsu07g04357 948 PANTHER TSET COMPLEX MEMBER TSTF 1 943 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04357 - - gmx:100777567 1717.59