Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04352 ATGAAAGAACCAGAAGAAGTGATGAGAATGCGAGGTGGTTGTGTACTTGGAAAGAAGACTATTCTGAAGAGTGACCATTTTCCTGGTTGTCAGAATAAGCGATTATCTCCTCAGATCGAAGGTGCTCCTAATTATCGTCAAGCTGAATCTTTGCATGTTCATGGTGTTGCAATCCCAACCCTTGATGGAATCAGAAATGTTCTTAATCACATTGGTGCTCGCTTACCACGGAATAAGCGACAAAAAGTTCTTTGGATTAGTCTTCGTGAAGAACCGCTTGTGTACATTAATGGCCGTCCTTTTGTTTTACGCGATGTGGAGAGACCGTTTTCCAACCTTGAGTATACGGGAATTAATAGGGAACGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGACATCCTGTTGGAAGCTGAAAGATATGGAAATAAGATCCTTGTGACGGATGAACTGCCTGATGGTCAGATGGTGGACCAATGGGAACCGGTGTCGTGTGATTCTGTAAAGACCCCATTAGAGGTGTATGAGGAATTGCAAGTGGAGGGATACCTTGTTGATTATGAACGTGTTCCTATAACTGATGAAAAAGCGCCTAAGGAACTGGATTTTGATATTTTGgtACATAAAATTTCTCAAGCTGATGTAAGTACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACGACAACTGGAATGGTCATCGCAACTTTGGTCTACCTCAATCGAATTGGGGCCTCTGGGATTCCAAGAAGCAATTCAATGGGTAGAATTTTTCAATCTATGACCAATGTTGCTGACCATTTGCCTAACTCAGAGGAGGCTATTCGCAGGGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTGTTAGAGGGCGGTGTTGATGGGAAACGACAAGTGGACAAAGTCATTGACAAATGTGCTTCAATGCAGAATCTGCGCGAAGCAATTGGCACCTATCGTAATAGCATTCTGCGACAGCCAGATGAGATGAAAAGGGAGGCATCACTTTCCTTTTTTGTAGAGTACTTGGAGAGATACtactttttaatatgttttgcTGTGTACCTTCATTCAGAAAGGGATATGCTCCATTCTAGTACTGCTGGTCACAGTAGTTTTTTTGACTGGATGAGAGCAAGGCCTGAACTCTACAGCATTATTCGCAGGTTGCTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTTGAAACCATCTTTAAAGATGATAGCTGAATCAACCGATGGCCGGCCATCTGAGATGGGTAATGTTGCTGCCTTGAGAAAAGGCGAGGTTCTTGGTAGTCAAACTGTTCTAAAAAGTGATCACTGTCCTGGATGCCAAAATCCAAGTTTGCCAGATAGAGTGGACGGCGCTCCTAATTTTCGAAAAGTTCCTGGATTTCCAGTTTTTGGTGTTGCAAATCCAACCATTGATGGTATCCGATCTGTCATTCATAGGATTGGCAGTACTAATGGTGGACGCCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTCATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGACCATACAAAAATATGTTGGAGTACACGGGTATTGACCGTGAAAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAAGACATTTTAAGGGAAGCTAAACAATATAGCAGTGCCATAATGGTTATTCATGAAACAGATGATGGACATATATATGATGCTTGGGAGCATGTTACCTCTGATGTGATTCAAACCCCACTTGAAGTTTTCAAAGGCCTGGAAGCTGATGGGTTTCCCATTAAGTATGCACGTGTGCCCATCACCGATGGAAAAGCTCCTAAACGTTCTGATTTCGATACTTTGGCAATTAATATTGCTTCTGCTCCAAAGGACACTGCTTTAGTTTTCAATTGtcagATGGGTAGGGGGAGGACTACTACCGGTACGGTCATAGCCTGCCTTGTGAAACTTCGTATGGATTTTGGTAGGCCCATTAAAATATTGAACGATAATATGACCCAAGAAGAATCAAATGGTGGTTCTTCAAGTGGAGATGAAACTTTGGGCTGTGTCACTGCATTGACCTCAAATACTTCACAAACGAAGATAGACGAAAAACAAAACCGTGTTTTTGGTATAAATGACATTCTCTTGTTATGGAAGATAACCACATTATTTGATAACGGTGTTGAATGCCGAGAGGCCCTAGATGCTGTTATTGATAGATGTTCTGCGCTTCAAAACATTCGTCAAGCTGTTCTGCAATATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGGGTAAGGAGGGTGGCTTTAAATCGTAGTGCCGAGTACTTGGAGCGGTATTTCCGTCTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTTGATGGGTTTTGTGGACAAGGAGAATCCAGAATGACATTTAAGGTTTGGTTGCATCAGAGGCCAGAGGTACAGGCTATGAAATGGAGCATCAGATTAAGACCGGGGAGATTTTTCACTGTCCCTGAGGAGTTGAGAGAATCACGAGAGTCTCAGCATGGAGATGCAGTGATGGAGGCTGCTGTCAAAGCCAGAAACGGTTCTGTTTTGGGGAAGGGCTCCATACTTAAAATGTATTTCTTTCCTGGACAAAgaacatccaataatatacaaATACACGGTGCACCTCATGTTTACAAGGTTGATGAATACCATGTATGTTGCATGGCAACTCCAACCATCTCTGGGGCCAAGGAGATGCTAAACTATTTGGGTGCTAAGTCTAAACCTGGGTTCACTGCTCGGAAAGTTATATTGACCGATGTAAGAGAAGAAGCTGTTGTTTATATCAATTGTGTTCCCTTTGTCCTTAGGGAGTTAAACAAACCTGTTGATACACTCAAGCACGTCGGAATCACGGGTCCTGTGGTTGAACACATGGAAGCACGGCTGAAAGAAGACATACTGGCTGAGATTAGACAATCTGGTGGGCGAATGCTACTACACCGTGAAGAATATGATCCTTCCACAAATCAGTCTGCTGTGGTTGGATACTGGGAAAGCATTCAGACCGATGATGTGAAGACACCAGCAGAGGTTTATTCTCTTCTAAAGGATGATGGATATGATATTGTCTATCGGAGGATACCCTTAACAAGAGAGAGAGATGCCTTGGCCTCTGATGTCGATGCAATACAGTACTGTCAAGATGACTCTGCAGGGAGTTACCTCTTTGTATCACACACAGGTTTTGGCGGAGTCGCATATGCAATGGCCATTATCTGTATTAAACTTGGTGCAGAGGCAAACTTTGCATCCAAAGTCCTGCAACCATCATTTGGTCCTGACTCATATGCAGTGACTGATGAGAATTCACATTCTCGAGCTTCTACTGAAACAGCACTTAGGATGGGCGATTATCGTGACATTTTGAACCTTACAAGAGTCCTCGTACATGGTCCCCAAAGCAAAGCAGATGTTGACATTGTCATCGAAAgatgtgcaGGCGCAGGGCATATACGAGATGATATTCTTTATTACAATAGAGAATTTGAGAAGTTCACTGATGATGACGACGAGGAGCGTGCATATCTTATGGACATGGGTATCAAAGCTTTGAGGCGGTACTTTTTCCTTATCACATTCAGATCGTATCTCTATTGCACCTCTCCTGATGATACAGAATTTGCTTCATGGATGGATGCAAGACCGGAGCTTGGTCATCTATGTAACAATCTAAGATTAGATAAATAG 3759 0.4214 MKEPEEVMRMRGGCVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQAESLHVHGVAIPTLDGIRNVLNHIGARLPRNKRQKVLWISLREEPLVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILLEAERYGNKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVEGYLVDYERVPITDEKAPKELDFDILVHKISQADVSTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSMGRIFQSMTNVADHLPNSEEAIRRGEYAVIRSLVRVLEGGVDGKRQVDKVIDKCASMQNLREAIGTYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYLHSERDMLHSSTAGHSSFFDWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKMIAESTDGRPSEMGNVAALRKGEVLGSQTVLKSDHCPGCQNPSLPDRVDGAPNFRKVPGFPVFGVANPTIDGIRSVIHRIGSTNGGRPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKQYSSAIMVIHETDDGHIYDAWEHVTSDVIQTPLEVFKGLEADGFPIKYARVPITDGKAPKRSDFDTLAINIASAPKDTALVFNCQMGRGRTTTGTVIACLVKLRMDFGRPIKILNDNMTQEESNGGSSSGDETLGCVTALTSNTSQTKIDEKQNRVFGINDILLLWKITTLFDNGVECREALDAVIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRSAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKVWLHQRPEVQAMKWSIRLRPGRFFTVPEELRESRESQHGDAVMEAAVKARNGSVLGKGSILKMYFFPGQRTSNNIQIHGAPHVYKVDEYHVCCMATPTISGAKEMLNYLGAKSKPGFTARKVILTDVREEAVVYINCVPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILAEIRQSGGRMLLHREEYDPSTNQSAVVGYWESIQTDDVKTPAEVYSLLKDDGYDIVYRRIPLTRERDALASDVDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIKLGAEANFASKVLQPSFGPDSYAVTDENSHSRASTETALRMGDYRDILNLTRVLVHGPQSKADVDIVIERCAGAGHIRDDILYYNREFEKFTDDDDEERAYLMDMGIKALRRYFFLITFRSYLYCTSPDDTEFASWMDARPELGHLCNNLRLDK 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04352 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 431 662 IPR029021 -
Tsu07g04352 1252 PANTHER METAL ION-BINDING PROTEIN 341 482 - -
Tsu07g04352 1252 CDD PTP_paladin 11 309 - -
Tsu07g04352 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 862 1099 IPR029021 -
Tsu07g04352 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 601 1252 - -
Tsu07g04352 1252 SMART PTPlike_phytase_2 504 660 - -
Tsu07g04352 1252 SMART PTPlike_phytase_2 86 241 - -
Tsu07g04352 1252 SMART PTPlike_phytase_2 942 1100 - -
Tsu07g04352 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 6 245 IPR029021 -
Tsu07g04352 1252 PANTHER METAL ION-BINDING PROTEIN 422 602 - -
Tsu07g04352 1252 PANTHER METAL ION-BINDING PROTEIN 2 337 - -
Tsu07g04352 1252 Pfam Inositol hexakisphosphate 943 1098 - -
Tsu07g04352 1252 Pfam Inositol hexakisphosphate 504 660 - -
Tsu07g04352 1252 Pfam Inositol hexakisphosphate 86 240 - -
Tsu07g04352 1252 Gene3D Protein tyrosine phosphatase superfamily 20 287 IPR029021 -
Tsu07g04352 1252 Gene3D Protein tyrosine phosphatase superfamily 879 1117 IPR029021 -
Tsu07g04352 1252 Gene3D Protein tyrosine phosphatase superfamily 444 689 IPR029021 -
Tsu07g04352 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 341 482 - -
Tsu07g04352 1252 PANTHER METAL ION-BINDING PROTEIN 601 1252 - -
Tsu07g04352 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 422 602 - -
Tsu07g04352 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 2 337 - -
Tsu07g04352 1252 CDD PTP_paladin 432 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04352 Tsu-Chr7 48782233 48792799 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04352 - - gmx:100788460 2224.13