Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04351 ATGATGATGGCAAGTGAGTTACATGGAATTCCTAAGTTATTAAGTTCAAAGAAGTCATCCTTCGACCGTGACAGGAATCTTCTGTCTTCCTCATTCTCTGGTATTAAGGTGAACTTGTTGCATTCGAAGAATGCTGCATCTGATTTTCCCTATCGAAAATTCTCAAGTGTTATTCAGAGAAACACAACTAAAAGATTTTTGGTTACTTCTACTCTTGCTGATGTTGCAAATGATTTTATGGCCTTACAATCACCAATTTTTGCTGGACAAGAAGCCAATCCAAAGACAGTTGCATCGATCATTTTAGGTGGTGGAGCTGGCACTCGTCTATTCCCCCTTACTCAAAATAGGGCTAAACCGGCTGTGCCATTCGGAGGATGTTATAGGCTGGTGGACATACCAATGAGTAATTGTATTAATAGCggaattaataaaatttacgtCCTTACACAATTCAATTCTCAGTCCCTCAACCGCCACATTGCTCGAACGTATAATTTGGGAGGTGGCGTTAACTGTGGTGGTAGTTTTATTGAGGTATTAGCAGCAACTCAAACACTTGGCGAATCAGGAAATAAGTGGTTTCAGGGCACAGCCGATGCTGTAAGACAATTCCTTTGGTTGTTTGAGGATGCCGAGCATAAAAACATAGAGAACATTCTGATATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGAACTTTTGAAGAAGCACATTAATTCATGCGCTGATGTATCTGTAACGTGTCTACCTGTAGATGGCAGTCGTGCCTCTGATTTTGGATTAGTGAAGGTTGATGAAAGAGGACGGATACGCCAGTTCATGGAAAAACCAAAGGGAGATTTATTAAGATCTATGCATGTAGATACGAGTATTTTTGGATTATCAGCTCACGAAGCAAGGAAGTTTCCATATATTGCATCGATGGGTATATATGTGTTTAAATTAGAAGTTCTTCGCAAACTTCTCAGGAGCTGTTATCCTAATGCAAATGATTTTGGATCCGAGGTGATTCCAATGGCTGCAAAAGATTTTAACGTCCAGGCATGTCTTTTCAGTGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCAAACTTGGCTCTTATGGACAAGCCGCCAAAGTTTCAGTTATATGATCAGTCAAAGCCGATTTTTACATGTCCTCGGTTCCTACCTCCAACTAAAATGGAGAAATGCCAGGTGATTAATTCTTTGGTTTCAGATGGTTGCTTTTTAAGAGAGTGCATGGTTGAAAAATCCATTGTAGGAATTCGCTCGAGACTTGACTCGGGAGATACCATGATGATGGGTGCTGACTATTACCAAACAGAGGCTGAAATTGCGTCTCTTTTAGCAGCGAGAGACGTTCCTATAGGCATAGGCAAGAATACAAAAATTATGAATTgtataattgacaaaaatgCAAGAATTGGAAATAACGTAATAATTGCAAACAAAGAGAATGTGCAGGAGGCTGACAGACCATCTGAGGGGTTTTATATTCGATCAGGGATCACGGTAGTGTTAAAAAACTCGGTAATAAACAATGGCACAATCATTTAA 1581 0.3903 MMMASELHGIPKLLSSKKSSFDRDRNLLSSSFSGIKVNLLHSKNAASDFPYRKFSSVIQRNTTKRFLVTSTLADVANDFMALQSPIFAGQEANPKTVASIILGGGAGTRLFPLTQNRAKPAVPFGGCYRLVDIPMSNCINSGINKIYVLTQFNSQSLNRHIARTYNLGGGVNCGGSFIEVLAATQTLGESGNKWFQGTADAVRQFLWLFEDAEHKNIENILILCGDQLYRMDYMELLKKHINSCADVSVTCLPVDGSRASDFGLVKVDERGRIRQFMEKPKGDLLRSMHVDTSIFGLSAHEARKFPYIASMGIYVFKLEVLRKLLRSCYPNANDFGSEVIPMAAKDFNVQACLFSGYWEDIGTIKSFFDANLALMDKPPKFQLYDQSKPIFTCPRFLPPTKMEKCQVINSLVSDGCFLRECMVEKSIVGIRSRLDSGDTMMMGADYYQTEAEIASLLAARDVPIGIGKNTKIMNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKNSVINNGTII 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04351 526 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 4 526 IPR011831 GO:0005978|GO:0008878
Tsu07g04351 526 SUPERFAMILY Trimeric LpxA-like enzymes 394 526 IPR011004 -
Tsu07g04351 526 CDD ADP_Glucose_PP 100 361 - -
Tsu07g04351 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 194 202 IPR005836 GO:0005978|GO:0008878
Tsu07g04351 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 103 122 IPR005836 GO:0005978|GO:0008878
Tsu07g04351 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 309 319 IPR005836 GO:0005978|GO:0008878
Tsu07g04351 526 CDD LbH_G1P_AT_C 398 520 - -
Tsu07g04351 526 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 4 526 - -
Tsu07g04351 526 Pfam Nucleotidyl transferase 99 375 IPR005835 GO:0009058|GO:0016779
Tsu07g04351 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 395 IPR029044 -
Tsu07g04351 526 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 98 490 IPR011831 GO:0005978|GO:0008878
Tsu07g04351 526 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 487 IPR029044 -
Tsu07g04351 526 Gene3D Hexapeptide repeat proteins 396 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04351 Tsu-Chr7 48777144 48780688 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04351 K00975 - gmx:100805739 917.146