Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04325 ATGGAAAGAGAAGAGCATCTACCACCGACACGACACGCGCAAATCAGATCTGGTGGTTACCGGAAAGAGTTGAGTCGTTGGACTAATCATCCCCGTCATTTCACTTTCTTCATAAGCTTCCTCTGGTCCGAGCGAGTGTTGTTTTTTGAACCTCCTCATTTCTACTTGCACCTCCCTCACTCGCTCCAGCTTGAAAAATGGCGGAAACCTTTCTATTCACATCTGAATCACAAGGTTGCTTGTGAGACATGCACCAAGACTAACATGGTCATGGTCTTTGGAGAAATTACAACCAAGGCTAATGTAGACTATGAGAAGATTGTCCGTGACACATGCCGCACCATTGGATTCATCTCCGATGATGTTGGTCTTGATGCTGACAAATGCAAGGTCTTGGTCAACATTGAGCAACAGAGTCCTGATATTGCTCAGGGTGTTCACGGCCACTTCACTAAGCGCCCAGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGATGAAACCCCTGAGCTTATGCCATTGAGCCATGTCCTTGCAACCAAACTAGGTGCTCGTCTTACTGAGGTTAGGAAGAACGGTACCTGTGCTTGGCTGAGACCAGACGGAAAGACACAAGTTACTGTTGAGTACTACAATGAGAACGGTGCTATGGTTCCAATTCGTGTCCATACTGTCCTCATTTCTACACAACATGACGAGACTGTCAGTAATGACCAGATTGCCGCTGATCTTAAGGAGCATGTTATCAAGCCTGTAATTCCCGAGAAGTACTTGGATGAGAAGACCATCTTCCACCTTAACCCTTCCGGCCGTTTTGTCATTGGTGGTCCCCATGGTGATGCCGGTCTAACCGGAAGAAAGATCATCATTGATACCTATGGTGGATGGGGAGCTCACGGTGGTGGTGCCTTTTCAGGCAAGGACCCAACTAAGGTCGACAGAAGTGGTGCCTATGTTGTGAGGCAGGCAGCAAAGAGTATTGTTGCTAATGGTCTTGCTCGCAGATGCATTGTTCAAGTTTCATACGCCATTGGTGTGCCTGAGCCTTTGTCGGTCTTTGTCGACAGTTATGGAACTGGAAAGATTCCTGACAAGGAGATTCTTCAAATCGTGAAGGAGAACTTTGACTTCAGACCTGGAATGATCACCATTAACTTGGACCTTAAGAGGGGTGGCAACAGGTTTCTTAAAACAGCTGCTTATGGACACTTTGGAAGGGATGATCCTGATTTCACTTGGGAAGTTGTGAAGCCACTCAAGTGGGAGAAGCCTCAAGCTTAA 1296 0.473 MEREEHLPPTRHAQIRSGGYRKELSRWTNHPRHFTFFISFLWSERVLFFEPPHFYLHLPHSLQLEKWRKPFYSHLNHKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGNRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04325 431 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 76 430 IPR002133 GO:0004478|GO:0005524|GO:0006556
Tsu07g04325 431 Gene3D - 76 318 - -
Tsu07g04325 431 Pfam S-adenosylmethionine synthetase, central domain 156 277 IPR022629 GO:0004478|GO:0006556
Tsu07g04325 431 Gene3D - 179 281 - -
Tsu07g04325 431 SUPERFAMILY S-adenosylmethionine synthetase 154 278 IPR022636 GO:0004478|GO:0006556
Tsu07g04325 431 ProSitePatterns S-adenosylmethionine synthase signature 2. 305 313 IPR022631 GO:0004478|GO:0006556
Tsu07g04325 431 ProSitePatterns S-adenosylmethionine synthase signature 1. 158 168 IPR022631 GO:0004478|GO:0006556
Tsu07g04325 431 Pfam S-adenosylmethionine synthetase, N-terminal domain 76 140 IPR022628 GO:0004478|GO:0006556
Tsu07g04325 431 CDD S-AdoMet_synt 78 422 - -
Tsu07g04325 431 Gene3D - 156 419 - -
Tsu07g04325 431 SUPERFAMILY S-adenosylmethionine synthetase 279 428 IPR022636 GO:0004478|GO:0006556
Tsu07g04325 431 PIRSF MAT 70 430 IPR002133 GO:0004478|GO:0005524|GO:0006556
Tsu07g04325 431 TIGRFAM metK: methionine adenosyltransferase 76 424 IPR002133 GO:0004478|GO:0005524|GO:0006556
Tsu07g04325 431 Pfam S-adenosylmethionine synthetase, C-terminal domain 279 419 IPR022630 GO:0004478|GO:0006556
Tsu07g04325 431 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 76 430 - -
Tsu07g04325 431 SUPERFAMILY S-adenosylmethionine synthetase 76 148 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04325 Tsu-Chr7 48591187 48593694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04325 K00789 - gmx:100777770 700.664