Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04320 ATGATGAAGCAAAGGTTGGAGGGTAAGGTGGCATTAATAACCGGTGCAGCCAGTGGAATCGGTGAAGAGACGGTGAAATTGTTTGCCGAAAATGGAGCATTTGTTATTGCAGCCGATATTCAAGACGAATTGGGTCATCAAGTTGCATCTTCAATAGGCTCAGATAAGGTAACATATCATCATTGTGACGTGCGTGACGAAAAACAGGTTGAAGAAACAATTAATTTCACTTTGGAGAAACATGGTCGCATCGATATTTTGTTTAGTAATGCAGGAATATTAGGCTCTTTATCGGGAATACTTGAGCTTGATCTGAATGAATTTGAGAAAACCATGGCTACAAATGTTTTTGGTGCAGCCGCTACAATTAAGCACGCTGCACGTGCCATGGTTGCGAAAAAAATCCGCGGATCGATCATATGTACTACTAGTGTTGCGGCTTCTATCGGTGGAACAGGTCCTAGTGGTTATACTGCATCAAAACATGGTCTTTTAGGACTTGTGAAATCAGCATGTAGTGAACTTGGTGGTTATGGAATTAGAGTTAATAGTATATCACCTTTTGGTGTTGGAACACCTCTTTCATGTGTAGCTTTTAATCTTGAACCTCATGAAGTTGAAGCTGCTAGTAGTGTTTATGGTAATTTGAAGGGTATTGTGTTGAAGGCTAAACATATTGCAGAAGCAGCTTTGTTTCTTGCTTCTGATGAAGCTGTTTATATAAGTGGTCATAACTTGGTTGTTGATGGTGGTTTCTCCGTGAGAGCAAATAATTCAGAACTCAAAGGTAGTTCACAATGTCAAAACGAAGGTCCTATGTCTAGCATATTAGAATTTAATCTAAGTGAATTTGACAACACCATGGCCGTGAATGTTCGTGGATCAGTTGCAACTATCAAACATGCTGCACGTGTCATGGTGGAAAGGAAAATCCGCGGATCCATAATTTGCACGGCCAGTATTGCCGGATCTATTGCTGGAAGCGGTGGTCATGATTATGTCACATCCAAACATGGTCTTATAGGACTCGTTCGCTCAACGTGCGGTGAGCTTGGAGGTTATGGAATAAGAGTCAATTCTATCTCACCGTATGTTGTTGCAACACCTCTTCCATGTAGGGGAATGGACATAGAGGTGAGTGAAGTCGAAGCTATCGGTAATTGTTATGCAAATTTGAAAGGAATTACATTGAAGACTACTCATATTGCATAA 1212 0.4076 MMKQRLEGKVALITGAASGIGEETVKLFAENGAFVIAADIQDELGHQVASSIGSDKVTYHHCDVRDEKQVEETINFTLEKHGRIDILFSNAGILGSLSGILELDLNEFEKTMATNVFGAAATIKHAARAMVAKKIRGSIICTTSVAASIGGTGPSGYTASKHGLLGLVKSACSELGGYGIRVNSISPFGVGTPLSCVAFNLEPHEVEAASSVYGNLKGIVLKAKHIAEAALFLASDEAVYISGHNLVVDGGFSVRANNSELKGSSQCQNEGPMSSILEFNLSEFDNTMAVNVRGSVATIKHAARVMVERKIRGSIICTASIAGSIAGSGGHDYVTSKHGLIGLVRSTCGELGGYGIRVNSISPYVVATPLPCRGMDIEVSEVEAIGNCYANLKGITLKTTHIA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04320 403 Gene3D - 1 258 - -
Tsu07g04320 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 254 IPR036291 -
Tsu07g04320 403 PANTHER OXIDOREDUCTASE-RELATED 265 403 - -
Tsu07g04320 403 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Tsu07g04320 403 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Tsu07g04320 403 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Tsu07g04320 403 PANTHER OXIDOREDUCTASE-RELATED 1 255 - -
Tsu07g04320 403 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Tsu07g04320 403 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Tsu07g04320 403 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Tsu07g04320 403 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Tsu07g04320 403 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Tsu07g04320 403 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Tsu07g04320 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 272 376 IPR036291 -
Tsu07g04320 403 Gene3D - 259 386 - -
Tsu07g04320 403 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 255 - -
Tsu07g04320 403 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 320 348 IPR020904 GO:0016491
Tsu07g04320 403 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 265 403 - -
Tsu07g04320 403 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Tsu07g04320 403 Pfam Enoyl-(Acyl carrier protein) reductase 274 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04320 Tsu-Chr7 48551937 48556379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04320 278 370 Miscellaneous Gene Families AT2G29150 32.258 7.48e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04320 - - cam:101510572 436.417