Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04318 ATGTCTATGACGAACGAATTGGGTCACCAAGTTGCGACTTCAATTGGCTTAGACAAAGTGAGCTACCACCATTGTGATGTGAGAGATGAGAAACAAGTTGAGGAAACGGTAGCTTTCGCATTGGAGAAATATGGTACCCTTGACATCATGTTCAGCAATGCTGGAATCGAGGGTCCTATATCTAGCATACTAGAATTTAATCTGAGTGAATTTGACAACACCATGGCTGTGAATGTTCGTGGACCAGCCGCAACTATCAAGCACGCTGCACGCGTCATGGTGGAAAGGAAAATCCGCGGATCCATAATTTGCACGGCCAGTATTGCCGGATCTATTGCTGGAAGTGGTGGTCATGATTATGTCACATCCAAACATGGTCTTATAGGCCTCGTTCGCTCAACGTGCGGTGAGCTTGGAGGTTATGGAATAAGAGTCAATTCTATCTCACCGTATGCCGTTGCAACACCTCTTCCATGTCGAGCATTGAACATGGAGGTGAGTGAAGTTGAAGCTATGGGGAATGATTATGCAAATTTGAAAGGAATTACATTGAATACTACTCATATTGCAGAAGCTGCTTTGTTTCTTGCATCAGATGAATCCGCTTATATTAGTGGACACAACTTGGTGGTCGATGGAGGGGCAGCAAGCGGGATAGGAGCAGAGACGGTGAAGTCATTCGTCGAAAATGGAGCATTTGTAGTTATAGCAGATATCAATGATGAATTAGGCCACCAAGTTGCAACTTCAATTGGCTTAGACAAAGTGAGCTACCACCATTGTGACGTGAGAGATGAGAAACAAGTTGAAGAAACGGTAGCTTTCACATTGGAGAAATATGGCACCCTTGACATCATGTTCAGCAATGCTGGAACCGCGCGTCCTATCTCTAGCATACTAGAATTTAATCTAACTGAATTTGACAATACCATGGCTGTGAATGTCCGTGGACCAGCTGCAACTATCAAGCACGCTGCAGCGTCATGGTGGAAAGAAAAGTCCGCGGGACTCGTTCGCTCAACGTGCAGTGAGCTTGGAGCTTATGGAATAAGAGTCAATTCTATCTCACCGTATGCTGTTGGCACACCTCTTGCATGTCGAGCACTGAACATGGAGGCGAGTGAAGTTGAAGCTATGGGGAATGATTCTGCAAATTTGAAAGGAATTACATTGAAGACTACTCATATTGCAGAAGCTGCTTTGTTTCTTGCAACAGATGAATCAGCTTATATTAGTGGACACAACTTGATGGTCAATGGAGGTTTCTCTGTCGTTAATACTTGTGTTCCTTGTATTACAAAATAA 1305 0.4398 MSMTNELGHQVATSIGLDKVSYHHCDVRDEKQVEETVAFALEKYGTLDIMFSNAGIEGPISSILEFNLSEFDNTMAVNVRGPAATIKHAARVMVERKIRGSIICTASIAGSIAGSGGHDYVTSKHGLIGLVRSTCGELGGYGIRVNSISPYAVATPLPCRALNMEVSEVEAMGNDYANLKGITLNTTHIAEAALFLASDESAYISGHNLVVDGGAASGIGAETVKSFVENGAFVVIADINDELGHQVATSIGLDKVSYHHCDVRDEKQVEETVAFTLEKYGTLDIMFSNAGTARPISSILEFNLTEFDNTMAVNVRGPAATIKHAAASWWKEKSAGLVRSTCSELGAYGIRVNSISPYAVGTPLACRALNMEASEVEAMGNDSANLKGITLKTTHIAEAALFLATDESAYISGHNLMVNGGFSVVNTCVPCITK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04318 434 PANTHER OXIDOREDUCTASE-RELATED 214 327 - -
Tsu07g04318 434 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 214 IPR036291 -
Tsu07g04318 434 Gene3D - 2 215 - -
Tsu07g04318 434 PRINTS Glucose/ribitol dehydrogenase family signature 120 139 IPR002347 -
Tsu07g04318 434 PRINTS Glucose/ribitol dehydrogenase family signature 94 110 IPR002347 -
Tsu07g04318 434 PRINTS Glucose/ribitol dehydrogenase family signature 141 158 IPR002347 -
Tsu07g04318 434 PRINTS Glucose/ribitol dehydrogenase family signature 179 199 IPR002347 -
Tsu07g04318 434 PRINTS Glucose/ribitol dehydrogenase family signature 45 56 IPR002347 -
Tsu07g04318 434 PANTHER OXIDOREDUCTASE-RELATED 335 433 - -
Tsu07g04318 434 PANTHER OXIDOREDUCTASE-RELATED 3 214 - -
Tsu07g04318 434 Pfam Enoyl-(Acyl carrier protein) reductase 335 423 - -
Tsu07g04318 434 Pfam Enoyl-(Acyl carrier protein) reductase 9 214 - -
Tsu07g04318 434 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 214 327 - -
Tsu07g04318 434 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 335 433 - -
Tsu07g04318 434 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3 214 - -
Tsu07g04318 434 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 45 56 IPR002347 -
Tsu07g04318 434 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 139 IPR002347 -
Tsu07g04318 434 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 108 IPR002347 -
Tsu07g04318 434 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 107 135 IPR020904 GO:0016491
Tsu07g04318 434 Gene3D - 334 433 - -
Tsu07g04318 434 Gene3D - 216 333 - -
Tsu07g04318 434 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 214 425 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04318 Tsu-Chr7 48542730 48545678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04318 214 421 Acyl Lipid Metabolism Gene Families AT3G55290 24.409 8.09e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04318 - - gmx:100798299 308.916