Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04311 ATGGCTTTGATCACCAGTACCAACCTTGCGAGTTTTCAGCTCAAAGAAACTGAAATTGCTTTTTCGCGTTTCACCATCACTCACAAGCATTTCGGATATCATCCTCATTGCAACAACGTGGTGTTAAGAGACACCGGAAGAAATGCAGCAATTCTTCCTAAAGTCAGAGCGCAGAATCTTCCTGATTATGTTCCAGAAtccaaattttacaaaattgaagcCATTCTCAGACCCTGGAGAATTCCTCATGTTTCTTCGGCTTTGTTGAAGATGGGAATTCGTGGTGTCACTATATCTGATGTCAAAGGGTTTGGTGCTCAGGGCGGTTCTAAAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAGTTTTGTTGCCAAAGTTAAAATGGAAATAGTGGTGAGGAAAGACCAGGTTGAGACagtaataaacaaaattacGGAGGTGGCAAGGACCGGGGAGATTGGTGATGGCAAAATTTTTTTGATCCCTGTATCCGATGTAATAAGAATTCGCACAGGTGAGCGTGGGGAGCAGGCTGAGAGGATGGCTGGGGGACTAACTGATTTGTCATCTGTTTGA 582 0.421 MALITSTNLASFQLKETEIAFSRFTITHKHFGYHPHCNNVVLRDTGRNAAILPKVRAQNLPDYVPESKFYKIEAILRPWRIPHVSSALLKMGIRGVTISDVKGFGAQGGSKERQGGSEFSEDSFVAKVKMEIVVRKDQVETVINKITEVARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMAGGLTDLSSV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04311 193 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 41 190 - -
Tsu07g04311 193 PRINTS P-II protein signature 91 109 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 PRINTS P-II protein signature 121 144 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 PRINTS P-II protein signature 70 85 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 PRINTS P-II protein signature 152 172 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 PANTHER NITROGEN REGULATORY PROTEIN P-II 41 190 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 SUPERFAMILY GlnB-like 70 180 IPR011322 -
Tsu07g04311 193 Pfam Nitrogen regulatory protein P-II 70 177 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 Gene3D - 58 191 IPR015867 -
Tsu07g04311 193 ProSiteProfiles P-II protein family profile. 69 181 IPR002187 GO:0006808|GO:0030234
Tsu07g04311 193 ProSitePatterns P-II protein C-terminal region signature. 152 165 IPR017918 GO:0006808|GO:0030234
Tsu07g04311 193 SMART P_II_3 72 174 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04311 Tsu-Chr7 48488706 48493176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04311 - - gmx:100499915 265.388