Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04307 ATGGATGCGAAAGATATACTTGGATTGCACAAAACCTCATTCCCATCttctattgaaaaaaaatctcgaCCTCCCAAAGAGTCTCAGAGAAAACCTGATGGCATTTCACGCGAGgtttATGCACTTACTGGTGGAATGCCATCACTTATGCCTTCAATTGATGCTTCTCAATTGAAAAAGAAGCATTCTCCGAACGAAAAGGTTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTCATCTTTACCATTGGGTTCGGATAGTCAATGGTGTTCTACCTACTGGGGACTATTCTTTTGCCAAGTATAATAAGTCTGTTGACATTATCAAATACACAGATGAGGAGTACGAAAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAAATGAACTATTCGACTTGTGTGAGAGGTTCGATCTCCGTTTTGTTGTAATAGCTGATAGATTCTCATCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGTGTTGCGGGCTATATTACTTGCTAGAGCTGCATCTTCTGGAGATGTTGCAATACATCCTCTCATTAAGGAGCCATATAATGTTTCACAAGAAATAGAGCGAAAACGGGCACTGTCCATGGTCCTCTCACAAACAAGACAACACGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGAATAGCTGAGTTACGGATGGCTTCTAAGgTTGCTGAACAGTCTCAATTGGTTGTTGCTACAAATGCTGATGCAGAAGTTACAGAGAGGGCTGTCCCCGGTGAATCTCTATCTCCATCGAATGTGCAACATCCACCAATGGCTGTGCCTTCCCCATTTACAGATAACGCTTCTACTATAGCTTCTCTTCGCATGCTTCGCGTATATTTGAGGACATATGCACTTGAGCAAATGGTGCAAGCTTCTAACTCATCTGCTGGAGTTCGAACTATCAAACGGGTTGAGCAAACATTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTGGAACTAAGACGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCTGAAGGTTCATCTTATCGTGATGGGACTTACGGTGAAACACCAGACACACCAAAGGATCGTACATTTATTCCCGACTCGTTGAATTTTGGagTTTCAGGTGAAAGGGTTGGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCAACCTATGGCGGCTCATAAAAGACCTAGAAAACAAAAGGCCTCAGATCTTTAA 1311 0.4157 MDAKDILGLHKTSFPSSIEKKSRPPKESQRKPDGISREVYALTGGMPSLMPSIDASQLKKKHSPNEKVTWQWLPFTNSARKDDLHLYHWVRIVNGVLPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPMWTKEETNELFDLCERFDLRFVVIADRFSSSRTVEELKDRYYSVLRAILLARAASSGDVAIHPLIKEPYNVSQEIERKRALSMVLSQTRQHEKRDEEVLIEAKRIAELRMASKVAEQSQLVVATNADAEVTERAVPGESLSPSNVQHPPMAVPSPFTDNASTIASLRMLRVYLRTYALEQMVQASNSSAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSYRDGTYGETPDTPKDRTFIPDSLNFGVSGERVGKKDQKRKGHGAQPMAAHKRPRKQKASDL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04307 436 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 436 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Tsu07g04307 436 SUPERFAMILY Homeodomain-like 126 177 IPR009057 -
Tsu07g04307 436 Pfam SANT/Myb-like domain of DAMP1 102 176 IPR032563 -
Tsu07g04307 436 PANTHER BNAA04G26950D PROTEIN 2 436 - -
Tsu07g04307 436 MobiDBLite consensus disorder prediction 16 34 - -
Tsu07g04307 436 SMART sant 126 175 IPR001005 -
Tsu07g04307 436 Gene3D - 99 186 - -
Tsu07g04307 436 MobiDBLite consensus disorder prediction 371 436 - -
Tsu07g04307 436 MobiDBLite consensus disorder prediction 14 34 - -
Tsu07g04307 436 CDD SANT_DMAP1_like 130 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04307 Tsu-Chr7 48453161 48458899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04307 K11324 - gmx:100818926 692.96