Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04305 ATGGCGACTCTAACTCCAATTTGTTCGTTAACAATAACAACCAAATTCAATTTCAGTTGCCAACAAAAACTACACAATCACCACCACCACTCCAATAACAATCTCAATTTCACCAATCCAAAGCATAGTAGTAGAATTTCAAGAACGGTAATCCGTAGTCAGAACCAATCTTCTCCGGGATTATACTCCGCCAAGAAATTCGACCTAACAGCTTCAAACGTCGATCTCGTTCTAGAAGATGTTCGTCCTTACCTCATCTCTGACGGAGGAAACGTCGACGTTGTATCCGTTGAGAACGGCGTCGTTTCTCTTAAGCTACAAGGAGCTTGCGAAAGTTGTCCTAGCTCAACAACGACGATGAAAATGGGAATCGAACGTGTTCTTAAGGAAAAATTTGGTGATTCAATTACAGATATCGTTCAAGTTTACGATGATGATCAAGCAAGAGAAACTACCGTTGAGGCGGTGAACAATCATTTAGAGATATTGAGACCAGCGATAAAGAATTACGGAGGTAGCGTGGAAGTGTTATCTGTTGAAGGTGGTGACTGTGTTGTGGAGTATGTTGGACCTGAATCAATTGGATCAGGTGTGAAAGCTGCTATCAAAGAGAAGTTTCCAGATATTCTCAATGTTACATTCTCCACCTAG 651 0.4132 MATLTPICSLTITTKFNFSCQQKLHNHHHHSNNNLNFTNPKHSSRISRTVIRSQNQSSPGLYSAKKFDLTASNVDLVLEDVRPYLISDGGNVDVVSVENGVVSLKLQGACESCPSSTTTMKMGIERVLKEKFGDSITDIVQVYDDDQARETTVEAVNNHLEILRPAIKNYGGSVEVLSVEGGDCVVEYVGPESIGSGVKAAIKEKFPDILNVTFST 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04305 216 Gene3D - 66 151 IPR034904 -
Tsu07g04305 216 Pfam NifU-like domain 75 134 IPR001075 GO:0005506|GO:0016226|GO:0051536
Tsu07g04305 216 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 19 215 - -
Tsu07g04305 216 Gene3D - 152 214 IPR034904 -
Tsu07g04305 216 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 19 215 - -
Tsu07g04305 216 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 72 143 IPR034904 -
Tsu07g04305 216 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 150 213 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04305 Tsu-Chr7 48447804 48449379 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04305 K22074 - gmx:100527356 259.996