Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04300 aTGGCTCCTCCCAATGAACCAGTGAATTCCAGAAACTTAGGTCTCATCAAAACAGAGTCTTTATTTGATTTATCTGAGGGAAAATTTACTGTGAAAGGTGTTCCTTTGTTGCATGATGTTCCTGAGAatgtttttttcaattctttctcttctataTGCAAAACCTCTGAATCAAATGCCCCACCTTCACTCCTTCAAAAAATTCTTGCTTTTTCTCACAAAGGTGGTTTCTTTGGATTCAACCATGAAATCCCATCTGATAGATTGATGAATTCATTGGGTAGTTTCAATGGAAAAGACTTTGTGAGTATTTTCAGGTTCAAAACATGGTGGTCTACTCAATGGGTTGGAAATTCTGGTTCTGATTTACAAATGGAAACTCAATGGATTCTTTTAGATGTTCCTGAAATCAAATCATATGTTGTAATCATTCCTAtaattgaaaaaggttttaGATCAGCACTTTTTCCTGGTCCTAATGACCATGTTATGATTTGTGTTGAAAGTGGTTCAATAAAGGTGAAAGAATCAAGTTTCAATTCAATTGcttatgttcattttaatgAAAATCCTTATGATTTGATGAAAGAAGCTTATAGTGTTTTAAGGATTCATCTCAACACTTTTAAGCTATTGGAAGAGAAAACAGTCCCAAATTTAGTTGATAAATTTGGTTGGTGCACTTGGGATGCTTTCTATTTAACTGTTAATCCTATTGGTGTATTTCATGGTCTTGATGATTTTACGAAAGGCGGCATTGATCCGAGGTTTGTTATCATTGATGATGGATGGCAAAGTATTAGTTTAGATGGTGCTAATCCTAATGAAGATGCTAAGAATCTTGTTCTTGGTGGTGAACAAATGATTGGTAGACTTTATAGGTTTGATGAATGTGACAAGTTCAAGAAATATGAAAGTGGATTATTATTAGGTCCTAATTCACCTCCTTTTAATCCAAAAACTATTAAGGATTTGATTACAAAGGGAATTGAACATGAACATTTAGGTAAGCAAAGAGATAAAGCTATTCTATGGAAAAGTTCTGAGTTGGCTGAGATTGAGTCAAAGATCAAGAAagtaataaaagaaattgatgatCTCTTTGGTGGAGAAGAAAGTAGTAGTGTTCTAAAAAGTGAATGTGGAAGCTTGTGTTGCAAGAAAAAGGAGTATGGATTGAAGGCTTTCACAAAAGATTTGAGGACAAAATTCAAAGGTTTACATGATGTTTATGTTTGGCATGCACTTTGTGGTGCTTGGGGAGGTGTAAGGCCAGGAAATACACATCTTAATACCAAAATTGTCCCTTGCAAACTTTCTCCTGGTCTTGATGGGACAATGGAGGATCTTGCTGTGGTTAAACTTATTGAAGGTTCAATTGGGCTAGTTGATCCTGATCAAGCCAATGATTTGTATGACTCCATGCACTCTTATCTTGCTGAATCTGGTGTCACAGGAGTCAAAGTTGATGTCATTCAtTGTCTTGAATATGTGTGTGGTGAATATGGAGGAAGAATTGACCTTGCCAAAGCTTACTATGAAGGGTTGACAAAATCCATTGCCAAGAATTTTAATGGAAATGGAATCATTGCTAGCATGCAACAGTGCAATGACTTTTTCTTCCTTGGAACAAACCAAGTTTCTATGGCAAGAGTTGggGATGATTTTTGGTTCCAAGATCCTAATGGTGATCCAATGGGAGCTTTTTGGTTACAAGGTGTACACATGATTCATTGTTCCTACAATAGCTTATGGATGGGGCAAATGATTCAACCTGATTGGGACATGTTCCAATCAGACCATATTTGTGCTGAATTTCATGCTGGTTCAAGAGCTATTTGTGGTGGTCCAATTTATGTGAGTGATAGTGTTGGTTCTCATGACtttgatttgattaagaaaCTTGTGTTCCCTGATGGTACAATCCCAAAGTGCATACATTTTCCTCTTCCAACTAGAGATTGTCTTTTCAAAAACCCTCTTTTTGACCAAACAACTGTTCTCAAAATTTGGAACTTCAATAAGTATGGAGGTGTGATTGGTGCTTTCAACTGTCAAGGGGCAGGATGGGATCCAAAAGAGCACAAGTTTAGGGGCTTCCCTGAATGCTACAAGCCAATAACTGGTAATGTGCATGTAACTGAAGTTGAATGGAATCAGAAGAAAGAAGCATCTCATTTGGGTAAGGCAGAAGAATATGTAGTCTACTTCAATCAAGCTAAAGAACTTTCTTTCATGACTCAAAAATCTGAACCAATTCAATTTACAATTCAACCATCCACATTTGAGTTATATAGTTTTGTTCCAGTCACAAAGCTAGGTGGCAGCATAAAATTTGCACCAATTGGGTTGACTAACATGTTCAACAGTGGTGGAACAATTCTTGATTTAGAATATGTTGAAACTTGTGCTAAGATTAAGGTTAAAGGTGGTGGGAATTTTCTTGCTTATTCAAGTGAATCACCAAAGAAGTTTCAATTGAATGGTTCTGATGTGGGTTTTGAGTGGCTAAGTGATGGAAAATTGTCTCTTAGTGTTTCTTGGATCGAAGAGGCTTGTGGGGTTTCTGATTTGTCAATTCTGTTCTAG 2589 0.3553 MAPPNEPVNSRNLGLIKTESLFDLSEGKFTVKGVPLLHDVPENVFFNSFSSICKTSESNAPPSLLQKILAFSHKGGFFGFNHEIPSDRLMNSLGSFNGKDFVSIFRFKTWWSTQWVGNSGSDLQMETQWILLDVPEIKSYVVIIPIIEKGFRSALFPGPNDHVMICVESGSIKVKESSFNSIAYVHFNENPYDLMKEAYSVLRIHLNTFKLLEEKTVPNLVDKFGWCTWDAFYLTVNPIGVFHGLDDFTKGGIDPRFVIIDDGWQSISLDGANPNEDAKNLVLGGEQMIGRLYRFDECDKFKKYESGLLLGPNSPPFNPKTIKDLITKGIEHEHLGKQRDKAILWKSSELAEIESKIKKVIKEIDDLFGGEESSSVLKSECGSLCCKKKEYGLKAFTKDLRTKFKGLHDVYVWHALCGAWGGVRPGNTHLNTKIVPCKLSPGLDGTMEDLAVVKLIEGSIGLVDPDQANDLYDSMHSYLAESGVTGVKVDVIHCLEYVCGEYGGRIDLAKAYYEGLTKSIAKNFNGNGIIASMQQCNDFFFLGTNQVSMARVGDDFWFQDPNGDPMGAFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHICAEFHAGSRAICGGPIYVSDSVGSHDFDLIKKLVFPDGTIPKCIHFPLPTRDCLFKNPLFDQTTVLKIWNFNKYGGVIGAFNCQGAGWDPKEHKFRGFPECYKPITGNVHVTEVEWNQKKEASHLGKAEEYVVYFNQAKELSFMTQKSEPIQFTIQPSTFELYSFVPVTKLGGSIKFAPIGLTNMFNSGGTILDLEYVETCAKIKVKGGGNFLAYSSESPKKFQLNGSDVGFEWLSDGKLSLSVSWIEEACGVSDLSILF 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04300 862 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 862 - -
Tsu07g04300 862 SUPERFAMILY (Trans)glycosidases 220 635 IPR017853 -
Tsu07g04300 862 Pfam Raffinose synthase or seed imbibition protein Sip1 22 845 IPR008811 -
Tsu07g04300 862 PANTHER - 1 862 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04300 Tsu-Chr7 48404006 48407439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04300 1 862 Glycoside Hydrolase AT4G01970 55.806 0.0 1007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04300 K06611 - gmx:100815922 1411.36