Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04298 ATGTCGATCGTAGATTCTTTTCTGTGCTTACTACTCTTCTTCGCTACTTATTCCATTTCATTTGTTTCTGCTGATTCCATCTATGGCTGCGGCGGATTTGTTCAGGCGAGCTCATCGTTGGTGAAGGCGAGAAAACAAACCGATGCTAAATTGGATTATTCACATGTCACGGTTGAGCTTCAAACAGTGGATGGATTGGTAAAGGATAGAACTCAATGTGCTCCAAATGGATACTATTTTATTCCGGTTTATGACAAGGGTTCCTTTGTAATTAAAGTCAATGGACCTGATGGGTGGTCATGGGATCCCGAAAAGGTTCCTGTGGTGGTTGACAATGATGGTTGCAATGGCAATGAAGATATAAATTTTCGTTTCACAGGGTTCTCTATATCTGGTAAAGTTGTGGGAGCTGCAGGTGGAGAAAGTTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGAACTATTGTCTCCTTCTGGGGATCTTGTCTCATCAGTCTTGACTTCATCATCAGGGAGCTACTTGTTTACAAATGTAAATCCAGGAAAATATGAGCTACGAGCTTCAAATCCTGATATGCAAGTTGAAGTTAAAGGTTCAACACAGGTGGAATTGGGCTTTGGAAATGGggtcattgatgatattttctTTGTCCCTGGGTATAGTATCAGTGGGTCTGTTGTTGCACAGGGTAACCCAATATTGGGAGTCCATATCTTCTTATATTCAGAGGACGTCTCTGAGATAGAATGTTTGCAAGGTTCTGCTAATGGTCCACGACAAGAAGTAGCTCTCTGTCATGCTGTATCAGATGCCGATGGAAAGTTCACATTCAATTCAATACCTTGTGgaAGTTATGAACTAGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCATCTAGTGTCCGTGTTAATGTTAAGCATCAACATGTAAAAGTGCCTCAAAAATTTCAGGTAACTGGATTTTCTGTTGGGGGACGTGTAGTTGATGGAAACAACATGGGAGTGGAGGGTGTTAAGGTCATAGTTGATGGTCATGAAAGGTCTATTACTGACAATCAAGGATATTACAAGCTTGATCAGGTTACATCCACACACTATACCATAGAAGCCCGGAAGGagcattacaaattcaagaaaTTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATTATCGCCCATTCATATGATCTTTGTGGTTTAGTTAGGATGGTTAGTAGCGGTCAGAAAGCAACGGTGGCTTTGACTCATGGACCTGATAATGTAAAAccacaaaagaaacaaacagaTGGAAATGGAAATTTCTGCTTTGAGGTTATTCCTGGTGAATATCGCTTGTCAGCTATTGCTTCTAGTCCCGATAATGCTGCTGGACTCATGTTTGCTCCATCTTATATTGATGTTGCAATCAAAAGCCCattgttgaatgttgaattttCGCAGGCTCTGGTCAATGTCCGTGGTGCTGTAGCCTGCAAGGAGAAATGCGATCCATCTGTATCTGTGACTCTTGTGAGGCATGTTGGTAAACATAATGAAGAGAGAAAGACAATCAGCTTGACCTCCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTGAAACATAGTACCCCCGAATCAGTGACCGCGGAAGATAATTGGTGTTGGGAGAAGAGCTTCATAGATGTAAATGTTGGAGCTGAGGACTTGGAAGGAATTGTTTTTGTTCAAAAAGGTTATTGGGTCAATTTTATCTCTACTCATGATGTTGATGGTTCCATAACTCAACCAGACGGGTCAACTGTGAATTTGAAGATTCGGAAAGGTTCCCAGCATATATGTGTTGAATTTCCCGGAATACATGAATTTAGTTTTATTGACTCATGTATCTTCTTTGGGAGCTCATCTGTGAAAATTGACACATCTAATCTATTGCCCATCCATCtaaaaggagaaaaacatcTTATTAAAGGACAAATAAATGTGCATACCGGCTTACTTGATGCATTGCCTGAGAAAATAGTTGTTGATATTTATCGTGATGGAGCTGACATTGCTGATAATGCCATGGCCATATTCAAGTCCCATGCGAAAGATCAAACAAATACTTCTGTCTTTGAGTATTCTGTTTGGGCCAATCCAGGAGAAAAGCTTACCTTTGCACCTCGGGACTCAAGgaatGATGGAGATAAAAAGCTTTTATTTTATCCTAGAGAACATCATGTATCAGTGACAGATGATAATTGTCAAGCTTATATTCCTACATTTTCTTGTCGGCTCGGGGTATATATTGAAGGATCAGTCTCGCCTCCTCTTTCTGGTGTTCATATCAGGATTTTTGCTGCTGGAGACAGCAGTATCACTGGACTTAAAAGTGGTGAACTAATACTTGAAACGACCACTGGAACTGATGGCTCCTTTGTGGCGGGTCCTCTGTATGATGATGTTGGTTATAATGTTCAGGCTTCaaagCCCGGTTATCATTTAAAACAAATTGGGCCTCATTCCTTTAGTTGTCAGAAGCTTGGTCAGATTTCAGTATATATACATCAcaaagatgatgataataaagaGCTCATTCCTTCAGTTTTGTTATCTTTGAGTGGTGATAATGGCTACAGAAACAACTCAGTATCTGGGGCTGGAGGGGctttcatatttgataatttgTTTCCTGGAATGTTCTATTTGCGTCCTGTTTTGAAGGAATATGCCTTCTCACCTCCGGCACAGGCAATAGAGCTTGGAGCAGGGGAGTTCAGAGAAGTTGTGTTCCAAGCCACGCGAGTAGCTTACAGTGCTATTGGCTTAGTCACACTGTTATCTGGCCAACCCAAAGGAGGAGTTTCAGTTGAAGCCCGGTCAGTGTCAAAAGGCTATTTTGAGGAAACTGTAACAGATTCCTCTGGGTATTACCGTCTTAGAGGACTACTGCCTGATACTGTCTATGCTGTCAAAGTAGCTAAAAGGGATGTTATGGGAAGTTCTAATATTGAGCGTGCATCTCCAGATTCTATTTCTGTTAAGGTTGGAACTGAGGATACCAAGGGTTTGGATTTTATAGTTTTTGAGGAGCCAGAATTAACAATCGTAAGTTGTCATGTCGAAGGAAATGGTACGGATGAACTCCGTAAACATCTTATGGTAGAAATCAGGTCTGCTAGTGAGACAAGCAAGATAGAGTCAGTCTTCCCCCTGCCAATTTCTAACTTCTTCCAAGTAAAAGGCTTATCAAAGGGCAGGCACCTTCTACAGCTTCGATCTAGTCTACCATCAAGTTCACTTAGATTTGAATCTGATATCATTGAGGTTGACTTggacaaaaatattcaaacacaTGTGGGCCCACTGAGATACAGGATTGATGATCAGCTGAAGCAGGAGTTGACTCCGGCACCAGTATTCCCCCTTATAATTGCATTTCTAGTTGTTGCACTATTTATCAGCATCCCTAGATTGAACGATTTGTATCAAGCCACAATAGACATACCCGCGCCGGGAACCGCATCATCAACTTCAAGAAAAGACGTGAGGAAACCACTGTTGCGAAAGAAGACTTATTAA 3600 0.3958 MSIVDSFLCLLLFFATYSISFVSADSIYGCGGFVQASSSLVKARKQTDAKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKVNGPDGWSWDPEKVPVVVDNDGCNGNEDINFRFTGFSISGKVVGAAGGESCSVKNGGPSNVKVELLSPSGDLVSSVLTSSSGSYLFTNVNPGKYELRASNPDMQVEVKGSTQVELGFGNGVIDDIFFVPGYSISGSVVAQGNPILGVHIFLYSEDVSEIECLQGSANGPRQEVALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPSSVRVNVKHQHVKVPQKFQVTGFSVGGRVVDGNNMGVEGVKVIVDGHERSITDNQGYYKLDQVTSTHYTIEARKEHYKFKKLENYMVLPNMASIEDIIAHSYDLCGLVRMVSSGQKATVALTHGPDNVKPQKKQTDGNGNFCFEVIPGEYRLSAIASSPDNAAGLMFAPSYIDVAIKSPLLNVEFSQALVNVRGAVACKEKCDPSVSVTLVRHVGKHNEERKTISLTSESSEFLFSDVIPGKYRLEVKHSTPESVTAEDNWCWEKSFIDVNVGAEDLEGIVFVQKGYWVNFISTHDVDGSITQPDGSTVNLKIRKGSQHICVEFPGIHEFSFIDSCIFFGSSSVKIDTSNLLPIHLKGEKHLIKGQINVHTGLLDALPEKIVVDIYRDGADIADNAMAIFKSHAKDQTNTSVFEYSVWANPGEKLTFAPRDSRNDGDKKLLFYPREHHVSVTDDNCQAYIPTFSCRLGVYIEGSVSPPLSGVHIRIFAAGDSSITGLKSGELILETTTGTDGSFVAGPLYDDVGYNVQASKPGYHLKQIGPHSFSCQKLGQISVYIHHKDDDNKELIPSVLLSLSGDNGYRNNSVSGAGGAFIFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGEFREVVFQATRVAYSAIGLVTLLSGQPKGGVSVEARSVSKGYFEETVTDSSGYYRLRGLLPDTVYAVKVAKRDVMGSSNIERASPDSISVKVGTEDTKGLDFIVFEEPELTIVSCHVEGNGTDELRKHLMVEIRSASETSKIESVFPLPISNFFQVKGLSKGRHLLQLRSSLPSSSLRFESDIIEVDLDKNIQTHVGPLRYRIDDQLKQELTPAPVFPLIIAFLVVALFISIPRLNDLYQATIDIPAPGTASSTSRKDVRKPLLRKKTY 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04298 1199 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 6 1186 - -
Tsu07g04298 1199 PANTHER NODAL MODULATOR 1-RELATED 6 1186 - -
Tsu07g04298 1199 SUPERFAMILY Carboxypeptidase regulatory domain-like 328 395 IPR008969 -
Tsu07g04298 1199 Gene3D - 330 404 - -
Tsu07g04298 1199 MobiDBLite consensus disorder prediction 1179 1199 - -
Tsu07g04298 1199 Gene3D Immunoglobulins 138 215 IPR013783 -
Tsu07g04298 1199 SUPERFAMILY Starch-binding domain-like 945 1033 IPR013784 GO:0030246
Tsu07g04298 1199 SUPERFAMILY Cna protein B-type domain 130 198 - -
Tsu07g04298 1199 SUPERFAMILY Cna protein B-type domain 865 923 - -
Tsu07g04298 1199 SUPERFAMILY Starch-binding domain-like 220 298 IPR013784 GO:0030246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04298 - - gmx:100794049 2066.97