Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04295 atGGAAGATTTAGGATCTACTCGGTTTGATGGTATCAGCAATGCTGTGAGGAGGAAGAGGAGTCAAACTTCGCGTAGGCCGCGACCTGATTCACAGCCTGTTCCTGATCCTGAAGGTCATGAATTGTCTCCTTCATCATCAACACCTCAATCGGAGGATCCTGACAAGGTTTCTAGTGATGAAAATGAAGGTTATGATAATACTGGTTCTAAGAGGAAAGAGTTTAATCTCAACCATATTGTTTCTCAGCAATCGTCCGCTACTGGACGAAGTGGTTTACAGAATAGACGCAGTAGTGAAGGCGTTCTTGCTCCCGCTAATTGGAAAGGTTCTAGTGGAAAATTCAAGGATGGCTTTGATTCAGAGTCGAAAGATGCAGATATATATGGTGGAAGGAATTCTGAGAGTTCGGGGCAGTTTGGTGTTTCTCAGGATGGATTGGGGAATGAGAGTAAGGTTAAGAAGGTTAAACTCAAGGTTGGTGGTGTGACGCGTACTATACAAGCTAACTCTGCATCTAATAGTGCTTCGGGAAGTGGATCAACTTCAAAAAGCTCTCGTTTATCGGACGGCTCCAGACCGCGCCAAAAGCAACAGAGTAATTCAGACGAAAATATATCTCCGTCTGATAAGAAGCGCAGCCTCAAAGGCCTTCCGTGGAAGGATTTCTCAAGAGGTGGTTTTGGTCTTGGGAAGGAGGAGTCATCGATGGGGAAGACATCCGGAAAGAACACATCTAGCAAACAAGGAGACAAGTCTGAACCTGTTCGTAAGAGCAAGAGAGTACCCAAAAGACGTGTACTGGATGGGGAATTTGGCGATGACGACGATGCTGATGATGAGATTCGGTACTTGGAAAAGCTTAAAACATCAAAAGTTTCTGCCGTCTacagagatgaagaagaattcagCAAGAAACATCGAAAACTCTCTAGCGTCTCTAATATGGAAAATGCTGCCTCATCAAGGTCAGGCAAAGATGGTAAGAAAAGGTCTAGATCTGATAGACTGCTTGAAGATACAGATTATGAGGATGACGAGGAGTCACGGTCTGATGGAGAGCTTGAcgataagaaaaagaaaaagcagaGGAAGGAATCTGTTGATGTATTGATGGACACTAAGAGGGAAATGACTCTTACAACGCGTCAACGGGCCCTTCAATCAGGCAAAGATGCATCTGCATCTAATGCGAGTTTAATTGAGTTTCCCAATGGATTACCTCCTGCCCCACCTAGAAAGCAAAAAGAGAAGCCTACGGAAGAAGAGCTGCTGTCAAAGAAAACTGAGGCTGCCAATAGGCGTAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGACTCCAGCAGGAAAAAGCGAgaggataaaataaaaaagcgcCAAGAAGAATTGGCACAGGAAAAGGCAGCCAATGCAGAAAAGCATGCATCAAATACCATCAGATATGTGATGGGTCCTAGTGGGACAGTTGTGACTTTTCCTGAGGAAATGGGGATCCCTCCGATTATAAATTCGAAGCCCGTCAGTTATCCTCCACCTCGTGAGAAGTGTGCCGGTCCATCATGTACGAATCCATATAAATACCGGGATTCAAAAACAAAGGCTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTCCAGGAGAATATTGCCGCTGAAACTACCTGTTGA 1704 0.4337 MEDLGSTRFDGISNAVRRKRSQTSRRPRPDSQPVPDPEGHELSPSSSTPQSEDPDKVSSDENEGYDNTGSKRKEFNLNHIVSQQSSATGRSGLQNRRSSEGVLAPANWKGSSGKFKDGFDSESKDADIYGGRNSESSGQFGVSQDGLGNESKVKKVKLKVGGVTRTIQANSASNSASGSGSTSKSSRLSDGSRPRQKQQSNSDENISPSDKKRSLKGLPWKDFSRGGFGLGKEESSMGKTSGKNTSSKQGDKSEPVRKSKRVPKRRVLDGEFGDDDDADDEIRYLEKLKTSKVSAVYRDEEEFSKKHRKLSSVSNMENAASSRSGKDGKKRSRSDRLLEDTDYEDDEESRSDGELDDKKKKKQRKESVDVLMDTKREMTLTTRQRALQSGKDASASNASLIEFPNGLPPAPPRKQKEKPTEEELLSKKTEAANRRRMQVEKAARESEAEAIRKILGQDSSRKKREDKIKKRQEELAQEKAANAEKHASNTIRYVMGPSGTVVTFPEEMGIPPIINSKPVSYPPPREKCAGPSCTNPYKYRDSKTKAPLCSLQCYKAVQENIAAETTC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04295 567 MobiDBLite consensus disorder prediction 295 312 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 1 281 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 295 487 - -
Tsu07g04295 567 PANTHER INO80 COMPLEX SUBUNIT B 1 567 IPR029523 GO:0006338|GO:0031011
Tsu07g04295 567 MobiDBLite consensus disorder prediction 74 101 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 381 401 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 164 205 - -
Tsu07g04295 567 Pfam HIT zinc finger 524 555 IPR007529 -
Tsu07g04295 567 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 567 - -
Tsu07g04295 567 Coils Coil 429 449 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 115 129 - -
Tsu07g04295 567 Pfam PAPA-1-like conserved region 423 508 IPR006880 GO:0031011
Tsu07g04295 567 Coils Coil 461 481 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 323 339 - -
Tsu07g04295 567 SMART PAPA_1_2 423 508 IPR006880 GO:0031011
Tsu07g04295 567 MobiDBLite consensus disorder prediction 130 146 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 352 380 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 515 536 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 250 272 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 54 73 - -
Tsu07g04295 567 MobiDBLite consensus disorder prediction 414 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04295 Tsu-Chr7 48355214 48358747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04295 - - gmx:100814323 788.875