Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04270 atggAGCTGCCAAACATTGAAATTTCTAACATCAACACCATTTCTAACCCTGATGTtgaaccaaaaccaaaaccgaTTCTTACCGGAAAGAGGAAGAGTGGTCGAATGAGTGTTCTTAGGGTGGCACTTCTCATAATGAGAGGAAGTcctaaaaaatcaaacaagattCCTAtagatgatgaatcaaagaataTTTGGAGCAAATTTGTTGGGTCAATTAGACCATTACATCTTCAAAGTATCCGATCCTCACGATCATTTAGCggcaagaaattcaatcaaccGGTTTCTCCTTCTTCTGAATCTACCGAAGATGCCAGCATGTTTACAGCAGAGGAGGAACCTTTATCGCCATTGCAAAAGTCACCATCGAATAGTCGTTACGCTTCGGCTGTAGGATTGAATAATATGGTGCAAAAGTCACCATCGAATAGCCGTTACGCTTCGGCTGTAGGATTAAACGAGATGGTACAAAGTGATGCGAATAGCCGTTACGCTTCGGCTGTAGGATTGAACGAGCTCGTGCCGAGTGATGAGGAGGATGAGAAAGAGGAAGCTATTGAAGAGGAGGTTGGTGAAAATGGGGATGAGAAGATTGATGTTAAAGCTGATGAGTTTATTGCACAATTCTATCAACAAATGAGGATGCAACGTTTGAATAATGTGGATCGTCATTACCAAGAGCGAAGTGAAAGGTCATTAGGATGTTAA 711 0.3741 MELPNIEISNINTISNPDVEPKPKPILTGKRKSGRMSVLRVALLIMRGSPKKSNKIPIDDESKNIWSKFVGSIRPLHLQSIRSSRSFSGKKFNQPVSPSSESTEDASMFTAEEEPLSPLQKSPSNSRYASAVGLNNMVQKSPSNSRYASAVGLNEMVQSDANSRYASAVGLNELVPSDEEDEKEEAIEEEVGENGDEKIDVKADEFIAQFYQQMRMQRLNNVDRHYQERSERSLGC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04270 236 MobiDBLite consensus disorder prediction 87 127 - -
Tsu07g04270 236 Pfam Cotton fibre expressed protein 196 230 IPR008480 -
Tsu07g04270 236 PANTHER COTTON FIBER PROTEIN 6 142 - -
Tsu07g04270 236 PANTHER COTTON FIBER PROTEIN 159 230 - -
Tsu07g04270 236 PANTHER COTTON FIBER PROTEIN 6 142 - -
Tsu07g04270 236 PANTHER COTTON FIBER PROTEIN 159 230 - -
Tsu07g04270 236 MobiDBLite consensus disorder prediction 87 106 - -
Tsu07g04270 236 MobiDBLite consensus disorder prediction 14 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04270 Tsu-Chr7 48165209 48165919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04270 - - mtr:MTR_7g109300 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04270 07 48165209 48165919 Tsu01g03761 01 45353000 45353977 PCT