Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04262 ATGGTTAACACATCTTCTTCATCTCCGGTGAAAATAACCGTCTCCTCCGGCGGAAAAACCGGAGGAAATAGAAGAAGCATTGGTCTAACAAGTCCAATTCCACGTCCTTCTGTTTCTAACAACAACCCTAACTCACCTCTCAGTAACATGTCAAACAGACTTTCTAGCGGCGGCGCTATTCGAAGATTATCAGGTGGTGGAGGTAACTGTTCATCCATGTCCAATGTTACAgaagaaacaacctctgaaTATGTTTCATACACTGTTCATATTCCTCCAACACCAGATCGAATGCCGCTTTCGTCTTCTCAAACAAGTCTCCCTGAAGAAAATGGTAAAAGCAATACCAACAAAAGTTACATCTCAGGTACAATTTTTACTGGAGGTTTTAATTCGGTTACACGTGGACATGTTATCGAATGTTCGAATGATCGCGATGATTTACCGTTGAAATCTAAATTGATCTGTGCAATGAAAGGCTGTGATGAGGAAGCGATCAAGGGTTGTACATGTGAGTGTGGTTTCAAGATTTGTAGAGATTGTTACAAAGAGATTTGTGGAAATGGTGGAGGTGGTAAATGTCCTGGTTGTAAAGATTCTTACAATAATGGTAGtgatggtgaagaaggtcaAGAGGAGGAAGAAGAGGTTTCTGAGTTTGAAGATCAAGCTTTACCTTTACCTTCCATGGCGGAATTCAAGATGGATAAGAGACTTTCTGTTGTGAAATCTTTTAAAGCTCAGAATCATCCACCTGATTTTGATCATACTCGTTGGTTATTTGAAACTAAAGGAACTTATGGTTATGGAAATGCTGTTTGGCCAAAAGATGGATATGGTTCTAATGGTTATGAACCCCCTCCTGATTTTGGAAGGAAAAGTAGAAGACCTTTGACTAGAAAAGTTGGGGTTTCAGCTGCTATTCTCAGCCCTTATAGGTTGCTTATTCTGCTGCGTCTAGCTgcacttggtttctttcttacATGGAGGGTTCGACACCGAAACCATGAGGCAATGTGGTTGTGGGGAATGTCAGTGACTTGTGAGCTATGGTTTGCATTTTCATGGATTCTTGATCAGCTGCCAAAGTTGTGTCCTGTCAACAGAGTTACTGATTTGTCTGTTTTGAAAGAAAGGTTTGAGTCTCCGCATCTGCGGAACCCGAAAGGAAGGTCTGATCTACCTGGAATAGATGTCTTTGTTTCAACTGCAGATCCAGAAAAGGAGCCTCCTCTTGTCACTGCAAACACCATTTTATCTATTCTTGCAGTTGATTATCCAGTGGAAAAAGTTGCTTGTTATTTGTCTGATGATGGTGGAGCTCTTTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCAAGAGTTTGGGTTCCTTTCTGTAGAAAACATCAAATTGAGCCAAGAAATCCTGAAGCATATTTCGGTCAGAAGCGCGATTTTCTCAAGAACAAGGTTCGGTTGGACTTTGTTAGGGAGAGAAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTGAGGATTAATTCCTTACCTGAATCTATAAGGAGAAGATCAGATGCTTACAATGCTCATGAGGAGTTACGAGCCAAGAAGAAACAGATGGAAACCGGTGCTGATGTATCTGAACTCCTTAAGGTCCCTAAAGCAACTTGGATGTCTGATGGTTCTCACTGGCCTGGAACTTGGTCTTCAGCAGAACCTGACCACTCTAGAGGTGACCATGCTGGTGTTATTCAGGCAATGTTGGCTCCACCGAATGTAGAGCCAGAATATGGTTCCGAAGCTGATGGAGATAATTTGATTGACACAACAGATGTTGATGTTAGGTTGCCAATGCTTGTTTATGTATCACGTGAGAAGAGGCCAGGATACGATCACAACAAGAAAGCGGGCGCCATGAATGCTCTTGTTCGAACTAGTGCCATAATGTCTAATGGACCATTCATTCTCAATCTTGACTGTGATCATTATGTCTACAACTCCTTGGCCTTAAGGGAAGGTATGTGCTTTATGCTTGACAGAGGTGGTGACAGGATATGTTATGTTCAATTCCCTCAAAGGTTTGAAGGCATTGACCCGAGTGATCGATATGCAAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGTTTACAAGGTCCAATGTATGTTGGAACTGGCTGCATTTTCAGAAGAACAGCTCTGTATGGTTTTAGTCCTCCTAGAGCTTCTGAACATCATGGATGGTTTGGTAGGAGGAAAATTAAGTTGTTTCTGAGAAAACCAAAGGTGtcaaaaaaggaagaagatgaagtttgtGTGCCAATCAATTGCGATCACAACGATGACGATGCAGATATTGAGTCCTTGCTTCTTCCCAAAAGGTTTGGGAACTCTACTACTTTAGCTGCATCCATTCCAGTCGCGGAATTCCAGGGAAGGCTGCTTCAGGATTCAAAAGGAAATGGAACACAAGGAAGGCCTGCAGGTTCTCTCGCCGTGCCTCGTGAACCTTTAGATGCTGCCACCGTTGCCGAGGCAATTAGTGTCATATCTTGTTACTATGAGGATAAAACTGAGTGGGGGAAAAGAGTAGGGTGGATATATGGTTCAGTTACAGAAGATGTTGTGACCGGTTACAGAATGCACAATAGAGGATGGAGATCAGTGTACTGTGTTACCAAAAGAGATGCTTTTAGAGGAACAGCTCCAATCAATTTAACAGACAGGCTACACCAGGTGCTTCGTTGGGCGACAGGGTCGGTCGAAATCTTCTTCTCAAGGAACAACGCTTTATTGGCAAGTCCTAGAATGAAATTCTTGCAAAGGGTAGCATATTTCAATGTTGGAATGTACCCTTTCACTTCAATGTTTCTGATTGTGTATTGCTTTCTACCTGCATTGTCCTTATTCTCAGGACAGTTTATAGTCCAAACTCTCAGTGTAACTTTTCTAGTGTTCTTGCTGGGAATCACAGTCACACTATGCATGCTTGCATTACTTGAGATCAAGTGGTCAGGTATCACTTTACATGATTGGTGGAGAAATGAACAGTTTTGGTTAATTGGCGGAACAAGTGCACATCCTGCTGCTGTTTTACAAGGCTTGTTGAAGGTAATAGCAGGAGTTGATATCTCATTCACACTTACATCAAAGTCAGCTACACCAGAAGATGGAGAAGATGAATTTGCTGATCTTTATGTGGTGAAATGGAGCTTTCTAATGGTTCCACCAATCACAATCATGATGGTGAATACTATTGCTATTGCTGTTGGAGTAGCTAGGACTTTATATAGTCCATTTCCACAATGGAGTAGACTAGTTGGAGGGTTGTTTTTCAGTTTCTGGGTGTTATGTCATCTTTACCCTtttgcaaaaggacttatgggaAGAAGAGGAAAGGTTCCAACCATTATCTATGTTTGGTCTGGATTACTCTCAATCATTATTTCATTGCTTTGGGTTTATGTTAGCCCTCCTGCTGGTGGAAGACCACAAGATTACATGAATTTTCAGTTTCCTTAA 3522 0.4069 MVNTSSSSPVKITVSSGGKTGGNRRSIGLTSPIPRPSVSNNNPNSPLSNMSNRLSSGGAIRRLSGGGGNCSSMSNVTEETTSEYVSYTVHIPPTPDRMPLSSSQTSLPEENGKSNTNKSYISGTIFTGGFNSVTRGHVIECSNDRDDLPLKSKLICAMKGCDEEAIKGCTCECGFKICRDCYKEICGNGGGGKCPGCKDSYNNGSDGEEGQEEEEEVSEFEDQALPLPSMAEFKMDKRLSVVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGSNGYEPPPDFGRKSRRPLTRKVGVSAAILSPYRLLILLRLAALGFFLTWRVRHRNHEAMWLWGMSVTCELWFAFSWILDQLPKLCPVNRVTDLSVLKERFESPHLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMETGADVSELLKVPKATWMSDGSHWPGTWSSAEPDHSRGDHAGVIQAMLAPPNVEPEYGSEADGDNLIDTTDVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYVYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRASEHHGWFGRRKIKLFLRKPKVSKKEEDEVCVPINCDHNDDDADIESLLLPKRFGNSTTLAASIPVAEFQGRLLQDSKGNGTQGRPAGSLAVPREPLDAATVAEAISVISCYYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPALSLFSGQFIVQTLSVTFLVFLLGITVTLCMLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGEDEFADLYVVKWSFLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISLLWVYVSPPAGGRPQDYMNFQFP 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04262 1173 Pfam RING/Ubox like zinc-binding domain 156 202 - -
Tsu07g04262 1173 Pfam Cellulose synthase 397 1161 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tsu07g04262 1173 SUPERFAMILY Nucleotide-diphospho-sugar transferases 412 965 IPR029044 -
Tsu07g04262 1173 MobiDBLite consensus disorder prediction 1 58 - -
Tsu07g04262 1173 MobiDBLite consensus disorder prediction 89 118 - -
Tsu07g04262 1173 MobiDBLite consensus disorder prediction 1 75 - -
Tsu07g04262 1173 SUPERFAMILY RING/U-box 150 203 - -
Tsu07g04262 1173 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 100 1162 - -
Tsu07g04262 1173 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 100 1162 - -
Tsu07g04262 1173 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 603 750 IPR029044 -
Tsu07g04262 1173 MobiDBLite consensus disorder prediction 97 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04262 Tsu-Chr7 48087864 48092741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04262 59 1173 Glycosyltransferase AT3G03050 66.344 0.0 1520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04262 K00770 - gmx:100797597 1989.54