Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04251 ATGTCTACGCAACCTAAGTTTACCAGAGTTCCCAGTATCAGAGACAGAGTTCAAGATACTCTCTCTGCTCACCGTAACGAACTCATTTCACTCCTCTccaggTACGTGGATCAGGGGAAAGGGATTTTGCAACCTCATAAGTTGATTGATGAGCTTGAAAGTATCCCTGGTGAAGATCATGCTACGGTGGATCTTAAAAATGGACCCTTTGCTGAAATTATCAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTCGTGGCAATAGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTTTGACCTCAGCGTGGAGCAATTGAGCGTTTCTGAATATCTCAGTTTCAAAGAAGAACTTGTAGATGGAAAGAGTGATGAACATTTTTTACTGGAGCTTGATTTTGAGCCATTTAATGCATCATTTCCTCGTCCAACTCGCTCATCTTCCATTGGCAATGGTGTGCAATTTCTCAACCGCCACCTCTCATCAAATATGTTTCGTAACAAAGATTGCTTGGAACCCTTGCTTGATTTCCTCCGTGTTCACAAATATAAAGGACATGCACTGATGTTAAATGATAGAATACAAAACATCTCCAAACTTCAGTCTGCTTTGTCCAAGGCCGAGGATAATCTTTCTAAGCTTGCGCCTGATACACTCTATTCTGAGTTTGAATATGTATTACAAGGATTAGGGTTTGAGAGAGGTTGGGGTGATACTGCTGGCCGGGTATTAGAGATGATGTATCTGCTATCGGATATTCTTCAGGCCCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTACCAATGATGTTCAATGTCGTTATATTGTCTCCACATGGCTTCTTTGGGCAAGCCAATGTCTTGGGTTTGCCTGATACCGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTGCTTCGGATCAAGAAACAAGGGCTTGATTTCACTCCTAGAATTCTAATTttaaCCAGGTTAATACCTGATGCAAAAGGGACAACATGCAACCAGCGACTAGAAAGAGTCAGTGGTACCGATTACACACATATTTTGCGTGTTCCATTCAGATCAGAAAAAGGAATTCTCCGTAAATGGATCTCAAGGTTTGATGTCTGGCCTTTCCTGGAAACTTATGCAGAGGATGTTGCTAGTGAAATTATTGCCGAGTTACAAGGTTATCCTGATTTCATCATAGGAAACTACAGTGATGGGAATCTCGTTGCATCTTTATTGTCTTACAAAATGGGAGTCACCCAGTGCACAATTGCGCATGCACTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTTGAGGATAAATACCATTTTTCATGTCAGTTCACTGCTGACCTAATAGCCATGAATAATGCTGATTTTATTATCACCAGTACATACCAAGAGATTGCAGGAACGAAGAATACTGTTGGCCAGTATGAGAGTCACACTGCTTTTACTCTTCCTGGACTCTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGACAATATATTTCCCCTATTCTGAGAAGGAGAAAAGACTCACATCCCTGCACGGTTCAATTGAAAAGCTATTATATGATAACGAGCCGAGTGATGAGTACACCGGTTCACTGGCGGATCGATCAAAGCCTATAATTTTCTCCATGGCAAGGCTAGACAGAGTTAAAAATATAACTGGTTTGGTAGAAAGCTATGCTAAGAACAGCAAATTGAGAGAACTGGTCAACCTTGTCGTCGTAGCTGGTTATATTGATGTGAAGAAATCAAGTGACAGAGAAGAAATTGCAGAGATTGAAAAGATGCATGAGCTCATGAAGCAGTATGATTTGAATGGCGAGTTTCGATGGATTACTGCCCAAACAAATAGAGCACGTAACGGGGAGCTTTATCGCTACATAGCAGATACAAAAGGTGCTTTCATTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGACTTGTGGGCTCCCTACGTTTGCTACTTGCCACGGTGGTCCTGCTGAGATCATCGAACATGGTGTATCAGGATTCCATATTGATCCTTATCATCCCGATCAAGCTTCAGAGTTATTGGTTAAATTTTTCCAACAATGTAAGGAGGACCCGAACCATTGGAATAAAATATCGGATGGTGGTCTTCAAAGAATATATGAAAGGTACACATGGAAGATCTATTCTGAAAGGCTTATGACCTTGGCTGGAGTTTATAGTTTCTGGAAATATGTTTCCAAACTAGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTACATTCTCAAGTTCCGCGATTTGGCAAATTCTGTTCCATTAGCAAAGGATGATGCAAATTAA 2439 0.4125 MSTQPKFTRVPSIRDRVQDTLSAHRNELISLLSRYVDQGKGILQPHKLIDELESIPGEDHATVDLKNGPFAEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFDLSVEQLSVSEYLSFKEELVDGKSDEHFLLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHKYKGHALMLNDRIQNISKLQSALSKAEDNLSKLAPDTLYSEFEYVLQGLGFERGWGDTAGRVLEMMYLLSDILQAPDPSTLETFLGRVPMMFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILILTRLIPDAKGTTCNQRLERVSGTDYTHILRVPFRSEKGILRKWISRFDVWPFLETYAEDVASEIIAELQGYPDFIIGNYSDGNLVASLLSYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEKEKRLTSLHGSIEKLLYDNEPSDEYTGSLADRSKPIIFSMARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHELMKQYDLNGEFRWITAQTNRARNGELYRYIADTKGAFIQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQASELLVKFFQQCKEDPNHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLAKDDAN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04251 812 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Tsu07g04251 812 Pfam Glycosyl transferases group 1 570 742 IPR001296 GO:0016757
Tsu07g04251 812 TIGRFAM sucr_synth: sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Tsu07g04251 812 PANTHER SUCROSE SYNTHASE 1 812 - -
Tsu07g04251 812 Coils Coil 197 217 - -
Tsu07g04251 812 PANTHER - 1 812 IPR012820 GO:0005985|GO:0016157
Tsu07g04251 812 Gene3D Glycogen Phosphorylase B; 530 757 - -
Tsu07g04251 812 Gene3D - 12 148 - -
Tsu07g04251 812 Gene3D - 149 278 - -
Tsu07g04251 812 Gene3D Glycogen Phosphorylase B; 283 800 - -
Tsu07g04251 812 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04251 Tsu-Chr7 48002636 48008543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04251 3 810 Glycosyltransferase AT4G02280 83.540 0.0 1443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04251 K00695 - gmx:100793371 1498.03