Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04242 atggaaaaaatagaGCACACAACGGTTCACACAAACGGAATAAAAATGCACGTAGCATCAATTGGTTCAGGTCCAGTAATCCTCTTCCTCCATGGCTTCCCCGAACTCTGGTATTCATGGCGCCACCAGCTTCTTTCCTTATCTGCTCTCGGTTACCGTGCCATCGCACCTGACCTTCGTGGTTATGGTGACACCGATGCACCGTCTTCTGCTTCTTCTTACACCCCCCTTCATATCGTCGGTGACCTCGTCGGACTTCTCGATGCTCTTGCTGTAGATCGAGTTTTTTTGGTTGGACATGATTGGGGTGCTGCTATGGCTTggtatttttgtttgttgaagCCTGATCGTGTTAAAGCTTTGGTTAATATGAGTGTTGTTTTTAGGTCTAGGAACCCTAGTAGAAAACCTGTTCAAACTATGAGAGCTATGATCGGTGATGATTATTATATGTGCAGGTTTCAGAAACCTGGGGAGGCTGAAGAAGAGTTTGCCCGTGCTGGTGCTACaagaataataaaatcattTCTTACGATGCGTGATCCACGTCCACTGTGTGTCCCAAAGGAGATAGGGTTTGGAGGTTCCCCTAACACTCCTATTACTTTACCTAAATGGCTGTCTGAAGAAGATGTCAATTATTATGCTACCAAATTTGAACAGAAAGGCTTTACTGGTGGGCTAAATTACTATCGCGCTCTGGACCTAACCTGGGAACTGATGGCACCATGGACCGGAGAACAGATCAAAGTACCGGTGAAGTTTATTGTGGGAGACCTGGACCTTACATATAACACACCAGGCGTTAAGGAGTATATACATAATGGTGGTTTTAAGAGACAAGTACCATACTTGCAAGAGATGGTTGTCATGGAAGGAGCAGCTCACTTTATAAATCAGGAAAGACCAGAAGAGATCAACAGTCACATATACGACTTCATCAAGAAATTTTAA 954 0.4277 MEKIEHTTVHTNGIKMHVASIGSGPVILFLHGFPELWYSWRHQLLSLSALGYRAIAPDLRGYGDTDAPSSASSYTPLHIVGDLVGLLDALAVDRVFLVGHDWGAAMAWYFCLLKPDRVKALVNMSVVFRSRNPSRKPVQTMRAMIGDDYYMCRFQKPGEAEEEFARAGATRIIKSFLTMRDPRPLCVPKEIGFGGSPNTPITLPKWLSEEDVNYYATKFEQKGFTGGLNYYRALDLTWELMAPWTGEQIKVPVKFIVGDLDLTYNTPGVKEYIHNGGFKRQVPYLQEMVVMEGAAHFINQERPEEINSHIYDFIKKF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04242 317 Pfam alpha/beta hydrolase fold 25 187 IPR000073 -
Tsu07g04242 317 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Tsu07g04242 317 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Tsu07g04242 317 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Tsu07g04242 317 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Tsu07g04242 317 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
Tsu07g04242 317 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Tsu07g04242 317 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Tsu07g04242 317 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Tsu07g04242 317 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Tsu07g04242 317 SUPERFAMILY alpha/beta-Hydrolases 2 316 IPR029058 -
Tsu07g04242 317 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2-LIKE 1 317 - -
Tsu07g04242 317 PANTHER EPOXIDE HYDROLASE 1 317 - -
Tsu07g04242 317 Gene3D alpha/beta hydrolase 1 317 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04242 Tsu-Chr7 47942789 47945730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04242 1 317 Acyl Lipid Metabolism Gene Families AT4G02340 71.609 5.32e-180 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04242 - - gmx:100799903 555.444