Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04240 ATGAACCCTCCAAAACCTCCGCGCCGGAAAGTTACTCAGGCAAACGGCGATGACTCTGGAGACAAACTCGACCAACTTCTTCTATCCTCCGCTATATGCAACAACGAAGACTTAGGCTCCTTCATCCGCAAAGCTTTCGCTTCCGGCAAACCAGAGACTCTCCAACATCACCTCAAACACTTCGCTCGCTCCAAAGAATCAGAGATCGAAGAAGTCTGTAAAGCACACTACCAAGACTTCATCCTCGCCGTCGATGATCTCCGATCCCTTCTCTCCGACGTTGAATCTCTCAAGTCATCACTCTCCGATTCAAACTCAAAACTCCAGTCCGTCGCTCGTCCTCTTCTCACTTCCCTCGATTCCTTCGTCGAAACACGAAACGTTTCGAAAAACGTTAATCTCGCTATCGATTCAGTTGAAGCTTGTGTTCAGTTAATGGAAGTTTGTTCACGCGCTAATAGTCATCTCTCCGGTGATAATTTCTACATGGCGTTGAAGTGTGTTGATGCAATCGAGAGAAATTATTTGGATAAAACGCAGTCGTCGACGTTGAAGAAGATGCTAGAGAAGAAGATTCCAGAGATTCGTTCTTATATAGAGAGAAAAGTGAATAAAGAGTTCGGTGATTGGTTAGTTGAGATCCGTGTTGTGAGTCGTAATTTAGGTCAATTGGCAATTGGTCAAGCTTCATCGGCGAGACAGAGAGAAGAAGATCTTAGAATCAAACAGCGTCAAGCGGAGGAACAGAGTAGACTCAGTGTTAGGGATTGTATTTATGCtttggaggaagaagatgaagatggaaTCGTTGCTGGGATCGGAGATGACGGTTACAGTAATGGTAATGGTGGTGGGAGTTTGCGATTTGATTTGACTCCGTTGTATAGAGCTTACCATATTCATCAAACATTAGGATTAGAGGATGGATTTAAGCAATATTATTTTGAGAATCGGAAACTTCAGTTGACTTCGGATTTTCAGGTATCGTCTATGACGCCTTTTCTTGAATCGCATCAAACGTTCTTTGCGCAGATTGCAGGTTTTTTTGTGGTGGAGGATCGTGTGTTGAGAACCGGTGGTGGTTTGATATCGAAAATGGAAGTTGAGAATTTGTGGGAAATTGCTGTTAGTAAAATGTGTTCTGTGTTGGAGGATCAATTTTCTAGAATGCAAACTGCTAATCATCTTTTGTTGATTAAGGACTATGTGAGTTTATTAGGAGTAACATTGCGTAGATTTGGTTACCCGATAGATGCGTTGCTTGATGTTTTAAGCAAACATAGGGATAAGTATCATGAATTGCTCTTGTCAGATTGTAGGAAGCAGATAGCTGAGGCTATAGGTGGTGATAACTTTGAGCAGATGTATATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTTCAGATTCAGACAACGGATATTATACCCGCTTTTCCTTACGTGGCACCGTTTTCGTCCACGGTTCCTGATTGTTGTCGTATTGTGCGGTCATTTATTGAGGATTCTGTAAGTTTCATGTCATATGGCGGGCAGCTTGAGTTCTATGATGTTGTTAAGAAATATTTAGATAAGCTTTTGAGTGAGGTTTTAGACGAAGCTTTGTTAAAGCTTATTAATACCTCGGTTAGTGGTGTTTCCCAGGCAATGCAAATGGCAGCAAATATGGCTGTTCTGGAGCGGGCGTGTGATTTTTTCTTTCGCCACGCAGCGCATCTTTCAGGGGTTCCTTTGAGAATGGTGGAGAGAAGCCGGAGGCAGTTCCCTTTGCGGAAAGCTCGTGATGCCGCGGAAGAGACGCTGTCGGGGCTGCTCAAAGCCAAAGTTGATGGATTTATGACATTGTTTGAGAATGTAAATTGGATGACTGATGATCCCCCTCAAGATGGAAATGAATATGTAAATGAGGTCATAATGTATTTGGAAACTGTGGTTTCGACTACTGCATCACAGATATTGCCAACTCAAGTCCTTAAAAGAGTTCTACTGGATGTTATTTCTCATATATCGGAGATGATTGTTGGGACTTTAGTTAGTGATTCTGTTAAGAGGTTTAGTGTCAGTGCCATAACTGGAATTGATACAGACATCAAGCTCTTAGAATCATTTGCTGAATCTCAGGCAACCCATTTATCTGATGGGGATGCTGATCAGTTGAAATTGGCACTTGCTGAGTCGAGGCAAATGGTTAATTTGCTAGTAAGCAATCATCCCGAGAATTTCCTGAACCCAGTGATCAGGGAGAGGAGTTACAGTGCTTTGGATCACAAGAAAGTGGTGATAGTTTCAGAAAAGTTGAAGGATCCTTCGGATCGACTCTTTGGAACCTTTGGTAGTCGAGGCTCCAGACAGAATCCAAAAAAGAAATCATTGGATACATTGATAAAAAGACTTAGGGATGTTAGCTGA 2415 0.4182 MNPPKPPRRKVTQANGDDSGDKLDQLLLSSAICNNEDLGSFIRKAFASGKPETLQHHLKHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVESLKSSLSDSNSKLQSVARPLLTSLDSFVETRNVSKNVNLAIDSVEACVQLMEVCSRANSHLSGDNFYMALKCVDAIERNYLDKTQSSTLKKMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIVAGIGDDGYSNGNGGGSLRFDLTPLYRAYHIHQTLGLEDGFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAIGGDNFEQMYMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYDVVKKYLDKLLSEVLDEALLKLINTSVSGVSQAMQMAANMAVLERACDFFFRHAAHLSGVPLRMVERSRRQFPLRKARDAAEETLSGLLKAKVDGFMTLFENVNWMTDDPPQDGNEYVNEVIMYLETVVSTTASQILPTQVLKRVLLDVISHISEMIVGTLVSDSVKRFSVSAITGIDTDIKLLESFAESQATHLSDGDADQLKLALAESRQMVNLLVSNHPENFLNPVIRERSYSALDHKKVVIVSEKLKDPSDRLFGTFGSRGSRQNPKKKSLDTLIKRLRDVS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04240 804 PIRSF Sec15 5 804 IPR007225 GO:0006886|GO:0090522
Tsu07g04240 804 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 595 743 IPR042044 -
Tsu07g04240 804 PANTHER SEC15 7 804 IPR007225 GO:0006886|GO:0090522
Tsu07g04240 804 Pfam Exocyst complex subunit Sec15-like 463 768 IPR046361 -
Tsu07g04240 804 MobiDBLite consensus disorder prediction 1 21 - -
Tsu07g04240 804 Gene3D - 417 589 IPR042045 -
Tsu07g04240 804 Coils Coil 229 249 - -
Tsu07g04240 804 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04240 Tsu-Chr7 47930826 47933497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04240 K19985 - gmx:100796432 1344.72