Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04234 ATGGATTTAGAGTTGCAATATCAAGAAGAGTTTTGGAGGAACTCAAGGGGAGTGCAACTTTTCACTTGCAAATGGGTGCCATTAACTTCTCCAAAGGCACTGGTTTTTCTTTGCCATGGCTATGGCATGGAATGCAGTCGTTTCATGAGAGAATGTGGAGTAAGGCTAGCTTGTGCCAAATATGCTGTGTATGGTATTGATTATGAAGGACATGGTCGTTCTGAAGGTGTTCGTTGTTACATTAACAAGTTTAATAACATTGTTAATGACTGTTATGACTTTTTCAAGTCAATTAGTGTGCTTGAAGAGTATAAGGGAAAGGCTAGGTTCTTATATGGAGAGTCCATGGGTGGAGCAGTTAGTCTACTTTTGCATCAAAAAGACCCTTCTTTTTGGGACGGTGCCGTTCTTGTCGCACCTATGTGTAAGATATCAGAGAAGGTGAAGCCACACCAAATTGTGATCAACATATTGACTAAAGTAGAAGATATCATACCAAAGTGGAAGATTGTTCCCACAAAGGATGTCATCAATTTAGCTTTTAAAGATCCAGCCAAAAGAGAAAGGATAAGGAAAAACAAGTTGATTTACCAGGACAAACCCAGGTTAAAAACAGCACTAGAAATGTTAAGAACCAGCATGAATCTTGAAGACACCTTATACAAGGTAACTATGCCATTTTTTGTAATGCATGGAGAAACAGATACAGTAACAGATCCAGAAGTAAGTAGAGCATTATATGAGAGAGCCAGTAGCAAAGACAAGACAATTAAATTGTATCCTGGAATGTGGCATGGTTTAACATCTGGTGAGCCTGATGACAACATTGAAAAAGTTTTTGAAGACATCATAACATGGCTTGATAAACATGCTAACAATAATGCTACTTATGAGACTTCACAATCAATTGAGACCTGTGACATTGAGAATTTGACACCAGTAGTATCATCGGCAAAGACTTTGAAGGAGACACAAAGGCGAAAATTCTATCTCTGTGGGTTGAGAGGAAGTCGTTTATTACATCACTCGGCAACTTAG 1038 0.3854 MDLELQYQEEFWRNSRGVQLFTCKWVPLTSPKALVFLCHGYGMECSRFMRECGVRLACAKYAVYGIDYEGHGRSEGVRCYINKFNNIVNDCYDFFKSISVLEEYKGKARFLYGESMGGAVSLLLHQKDPSFWDGAVLVAPMCKISEKVKPHQIVINILTKVEDIIPKWKIVPTKDVINLAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRTSMNLEDTLYKVTMPFFVMHGETDTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGEPDDNIEKVFEDIITWLDKHANNNATYETSQSIETCDIENLTPVVSSAKTLKETQRRKFYLCGLRGSRLLHHSAT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04234 345 Pfam Serine aminopeptidase, S33 30 272 IPR022742 -
Tsu07g04234 345 PANTHER PHOSPHOLIPASE-RELATED 8 302 - -
Tsu07g04234 345 SUPERFAMILY alpha/beta-Hydrolases 6 291 IPR029058 -
Tsu07g04234 345 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Tsu07g04234 345 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Tsu07g04234 345 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Tsu07g04234 345 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 302 - -
Tsu07g04234 345 Gene3D alpha/beta hydrolase 4 299 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04234 Tsu-Chr7 47870406 47874230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04234 48 343 Acyl Lipid Metabolism Gene Families AT2G47630 66.555 5.50e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04234 K18368 - jre:108986861 521.161