Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04224 ATGcTTCCTCTTTCACTTCTTAAGACTGCACAAGGCCACCCTATGTTGGTGGAGCTGAAAAATGGAGAGACTTATAATGGACATTTGGTTAATTGTGATACATGGATGAACATTCATCTCCGAGAAGTTATTTGTACCTCTAaaGATGGAGACAGATTTTGGCGGATGCCCGAGTGTTATATACGAGGGAATACAATTAAGTACCTTCGTGTTCCTGATGAGGTTATTGACAAAGTGCAAGAAGAAACCAAGAGCCGTACAGATCGCAAGCCACCTGGTGTGGGACGTGGTAGGGGAAGAGGCGGAGGTAGGGAGGAAGGTGCTGGTTCTGGTGCTGGTGGACGCCAACCAAAAGGTATTGGGCGTGGTTTTGATGATGGTGGCGCTAGAGGAGCTGGAGGCCGAGGTAGGGGTAACCAAGGTGGAAAGCCTGGAGGAAGCAGAGGTGCTGGACGAGGTAGGGGTTGA 468 0.4915 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGGGREEGAGSGAGGRQPKGIGRGFDDGGARGAGGRGRGNQGGKPGGSRGAGRGRG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04224 155 MobiDBLite consensus disorder prediction 79 103 - -
Tsu07g04224 155 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 144 IPR027141 GO:0006396
Tsu07g04224 155 Gene3D - 1 83 - -
Tsu07g04224 155 PANTHER SM-LIKE PROTEIN LSM4 1 144 - -
Tsu07g04224 155 Pfam LSM domain 6 70 IPR001163 -
Tsu07g04224 155 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Tsu07g04224 155 MobiDBLite consensus disorder prediction 79 155 - -
Tsu07g04224 155 SUPERFAMILY Sm-like ribonucleoproteins 3 122 IPR010920 -
Tsu07g04224 155 SMART Sm3 5 71 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04224 Tsu-Chr7 47805033 47808253 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04224 K12623 - gmx:100500134 207.608