Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04222 ATGTTAGAAAAATGTTTAGGACCTCAAAGAGCTAGAAAATTTCAAAGATTTCTCAACCACTGTAAGGTTACAATCCTCTGTCTCTTCCTCACCATTATTGTCCTACGTGGCACAATCGGTGCCGGTAAATTCGGTACGCCGGAGCAAGATTTCGTCGACATTCGCAACCGTTTCGCCTCTCGTAAGCTACCTGAATCATCTCACCGCATTCTCGGCGAGAttcattcaacaacaacaacaacaacaacatcttcttcttctcattcaGATAGTTCTACTTCTTCAACAACCAATTACAACGCTTTTGATATCAACACAATATTGGTTgatgaagaagaacaagaagaggAGAAAAAAAGGAGCTTGAATGAGCCTTATCGTTTAGGACCCAAAATTTCGAATTGGGATGAACAGAGATCAAAATGGCTTCTTGAAAACCCCAATTTTCCGAATTTTATTCGACCCGAAAAGCCTCGTGTGCTTTTGGTAACTGGGTCATCACCAAAACCGTGTGAGAATCCGGTTGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAGATTGATTATTGTCGTTTACATGGTATTGAGGTTTTTTACAATATGGCTCTTTTTGATGCTGAAATGGCTGGTTTTTGGGCCAAGCTTCCATTGATTCGTAATCTTCTTTTGTCACACCCAGAAGTTGAGTTTTTGTGGTGGATGGATAGTGATGCTATGTTTACCGATATGGCGTTTGAGGTTCCGTGGGAGAGGTATAAAGACTCTAATTTGGTTATGCATGGTTGGAATGAGATGGTGTATGATCAGAAGAATTGGATTGGGTTGAATACTGGGAGTTTTTTGTTGAGGAATTGTCAATGGTCATTGGATATTCTTGATTCTTGGGCACCAATGGGACCGAAAGGGAAAGTTAGGGAGGAAGCGGGGAAAGTGCTTACACGCGAACTCAAAGATAGGCCGGTTTTTGAAGCCGATGATCAATCTGCTATGGTTTATTTGTTGGCTAAGGAGAAGGAAAAATGGGGTGATAAGGTTTATCTTGAGAATGGTTATTATTTGCATGGTTATTGGGGGATTTTGGTTGATAGATATGAGGAAATGATTGAGAATTATCATCCTGGTTTTGGTGATCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGTAAGCCTTGTGGGAAGTTTGGGGATTATCCTGTGGAGAGATGCTTGAAGCAGATGGATAGAGCTTTCAATTTTGGTGATAATCAGATATTGCAGATTTATGGATTCACTCATAAGTCATTGGTTAGTAGGAGAGTTAGGAGAATAAGGAATGAGACTAGTAACCCTCTTGAGGTTAAAGATGAACTTGGTTTGCTCCATCCAACTTTTAAAGCTGTTGATGTATCATCTTCTAGGTGA 1407 0.3859 MLEKCLGPQRARKFQRFLNHCKVTILCLFLTIIVLRGTIGAGKFGTPEQDFVDIRNRFASRKLPESSHRILGEIHSTTTTTTTSSSSHSDSSTSSTTNYNAFDINTILVDEEEQEEEKKRSLNEPYRLGPKISNWDEQRSKWLLENPNFPNFIRPEKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALFDAEMAGFWAKLPLIRNLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDSWAPMGPKGKVREEAGKVLTRELKDRPVFEADDQSAMVYLLAKEKEKWGDKVYLENGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLVSRRVRRIRNETSNPLEVKDELGLLHPTFKAVDVSSSR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04222 468 Pfam galactosyl transferase GMA12/MNN10 family 157 396 IPR008630 GO:0016021|GO:0016757
Tsu07g04222 468 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 156 320 IPR029044 -
Tsu07g04222 468 MobiDBLite consensus disorder prediction 71 97 - -
Tsu07g04222 468 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 467 - -
Tsu07g04222 468 MobiDBLite consensus disorder prediction 69 97 - -
Tsu07g04222 468 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 467 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04222 Tsu-Chr7 47792966 47794815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04222 1 467 Glycosyltransferase AT3G62720 75.589 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04222 K08238 - gmx:100794266 830.861