Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04216 ATGGCCACCATAATCGACGGCAAAGCCGTCGCACAAACTATCCGATCTGAAATCGCCGATGAAGTCCGTCTCCTCTCTCAAAAATACGGAAAGGTTCCGGGACTTGCAGTGGTGATTGTAGGGAACAGAAAGGATTCGGAAAGCTATGTCAAAACCAAGAGAAAAGCTTGTGCTGATTTGGGAATCAATTCCTTCGATATTGATCTTCCAGAAGAAGTTTCTGAAGCTGAAGTTATAAAAAATGTTCATGAATTGAACGCTAATCCTAATGTACATGGTATATTGGTTCAACTTCCATTGCCTAAGCACATAAATGAAGAGAAAGTTTTGACTGAAATCAGCCTTGCGAAGGATGTCGATGGCTTCCATCCTTTGAACATTGGCAAGCTTGCAATGAAAGGCAGAGACCCTCTGTTCCTTCCCTGTACACCCAAGGCATGCCTTGAACTATTGTCACGAAGTGGTGTAAGTATAAAGGGGAAGAGGGCAGTTGTGGTTGGTAGAAGCAACATAGTTGGATTACCAGCTTCACTGCTGCTTTTGAAAGCAGATGCCACAGTTACCATTGTTCATTCACAAACAAGTCAATCAGAAACGGAAAGTATCATACGTGAATCAGATATTGTTATTGCAGCAGCAGGACAAGCAAAGATGATCAAGGGAAGCTGGATAAAACCTGGAGCTGCAGTGATAGATGTTGGCACAAATTCTGTTGATGATCCAACTAGGAAGTCAGGTTACAGGCTTGTTGGAGATGTAGATTTTGAGGAAGCATCTAAAGTAGCTGGTTGGATTACTCCTGTTCCTGGCGGTGTGGGTCCAATGACAGTCACAATGTTGCTGAAGAACACTTTGGAGGGTGCTAAGCGCAACATTGAGCAGAATAACTAA 891 0.4321 MATIIDGKAVAQTIRSEIADEVRLLSQKYGKVPGLAVVIVGNRKDSESYVKTKRKACADLGINSFDIDLPEEVSEAEVIKNVHELNANPNVHGILVQLPLPKHINEEKVLTEISLAKDVDGFHPLNIGKLAMKGRDPLFLPCTPKACLELLSRSGVSIKGKRAVVVGRSNIVGLPASLLLLKADATVTIVHSQTSQSETESIIRESDIVIAAAGQAKMIKGSWIKPGAAVIDVGTNSVDDPTRKSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLKNTLEGAKRNIEQNN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04216 296 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 291 IPR020631 GO:0004488
Tsu07g04216 296 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 1 121 IPR046346 -
Tsu07g04216 296 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 2 292 - -
Tsu07g04216 296 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 IPR020630 GO:0004488
Tsu07g04216 296 Gene3D - 5 268 - -
Tsu07g04216 296 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 IPR020867 GO:0003824
Tsu07g04216 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 290 IPR036291 -
Tsu07g04216 296 PANTHER BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL 2 292 - -
Tsu07g04216 296 CDD NAD_bind_m-THF_DH_Cyclohyd 117 289 IPR020631 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 IPR000672 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 207 236 IPR000672 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 265 283 IPR000672 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 248 264 IPR000672 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 IPR000672 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 IPR000672 GO:0004488
Tsu07g04216 296 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 IPR000672 GO:0004488
Tsu07g04216 296 Hamap Bifunctional protein FolD [folD]. 2 292 IPR000672 GO:0004488
Tsu07g04216 296 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 269 277 IPR020867 GO:0003824
Tsu07g04216 296 Gene3D Leucine Dehydrogenase, chain A, domain 1 7 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04216 Tsu-Chr7 47770247 47773785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04216 - - gmx:100792682 521.161