Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04215 ATGGCTGCAGCCAAGCCACCATCTGATCAACAAGTTCCTCCTGGATCATCAGAAGAAACTCTCAAATATCAGACATGGGTTTTGAAAGTCTTGATCCACTGTGATGGCTGTACAAAAAGAGTCAAGAAAATTCTTCAAGGAATTGAAGGGGTTTATAAAACAGAAATTGACTCTCGGGCGCACAAGGTTACCGTTACAGGTAATGTTGCGGCCGAGACTCTCATCAAGAAGCTTTCAAGATCAGGAAAATCAGTAGAACTTTGGCCAGAAAAGCCTCCTGAGAAGAAAGataataagaaagataaaaagtCTTCAAAATCAAAAGATGAAACTGAAAATAGTACTAATAAGGAGAAAGAAGGCCAAAAAAATACTGAACAAGTTGGTGAAATTAGTCATGATCATCAAGGATGtatagatgatgatgatgcagatgatgatggtgaagaagattcGGATCATAAAgaaggtaataataataataatggtgaTAGTAATAAAAGTGAGGGGGGTgctaaaaagaagaagaaaaagaaaaagaagaacaaaagtGGTTCTGTTCCTCCTAATAATGGAGGAGGAGAAAAAGTGATTATTGGTACAGAAACAATTGATGCAGCAGTTGCTATTCCCAAGGAAATTATTATGCCTCCACAACCTCAAGTACTTCAGCAGCAGCATGGTTATAACCCATATCAACCACATATGTACTATTCACACCCTCCTATTACTCCAACACCACCACCATATGGATTAAGTTATAACACATCATATCCTGTTTCAACTACTTCTTCTTATTATGTTGGTGCTCCTGTCATGCCTATGCATGCTAATTATGCTAATTATCCTCCACCTCCTCCACCATCCCATCCAATCAATAACTATGGTCATCATAATGATCATGAAGAATATGAAGGTGGATATTGCTCCATTATGTGA 939 0.3397 MAAAKPPSDQQVPPGSSEETLKYQTWVLKVLIHCDGCTKRVKKILQGIEGVYKTEIDSRAHKVTVTGNVAAETLIKKLSRSGKSVELWPEKPPEKKDNKKDKKSSKSKDETENSTNKEKEGQKNTEQVGEISHDHQGCIDDDDADDDGEEDSDHKEGNNNNNGDSNKSEGGAKKKKKKKKKNKSGSVPPNNGGGEKVIIGTETIDAAVAIPKEIIMPPQPQVLQQQHGYNPYQPHMYYSHPPITPTPPPYGLSYNTSYPVSTTSSYYVGAPVMPMHANYANYPPPPPPSHPINNYGHHNDHEEYEGGYCSIM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04215 312 MobiDBLite consensus disorder prediction 83 139 - -
Tsu07g04215 312 ProSiteProfiles Heavy-metal-associated domain profile. 32 87 IPR006121 GO:0046872
Tsu07g04215 312 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 18 312 - -
Tsu07g04215 312 SUPERFAMILY HMA, heavy metal-associated domain 23 89 IPR036163 GO:0046872
Tsu07g04215 312 CDD HMA 32 86 IPR006121 GO:0046872
Tsu07g04215 312 Pfam Heavy-metal-associated domain 32 83 IPR006121 GO:0046872
Tsu07g04215 312 Gene3D - 21 87 - -
Tsu07g04215 312 MobiDBLite consensus disorder prediction 82 198 - -
Tsu07g04215 312 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 18 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04215 Tsu-Chr7 47759923 47761985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04215 - - gmx:100791626 231.491