Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04207 atggaagaagatgatgaattgGGAGAACCGGAAGTGGTACCTCGTGTTGGAGATGAGTACCAGGCAGAACTGCCGCCATTTACTGCAGAACCTTATTTTTCTCAGCTTGTGAAAAGGAAAGGAGATTCAGAAATTGCGGAAAATATGTCAGACTCCTTTTTAGTAGCACTGCCCCTTCCTCTTATGTGGACACATTCTGAATTCGGTAGGAGTTGCGGTGGTGGTGAGACTTTAGAATCTGTCACAAGTCAAAAGGGGCGTGGTATTTGTGAAGGAAAGAATGTAGGAGGGTTtccaaattttaaatcctcTTACAGAAATGTTGAGACAGACATTGGCTCATGCCCAGAACTGAGAACCGAACTAGATCAGCCAAGAAACAAGTATCTTCTTCCTGAATTGTTGGGTTGTCAGTCTTGGACAGATATTGAATATAACAGTTTTCTCCTTGGCCTCTATGCATTTGGGAAGAACCTTAATTTTTTGAAGAGATTTGTTGGGACTAAAAGTATGGGAGACATATTGTTTTTCTATTACGGTAAATTTTTTAGGTCTAAAGGATATTCCCGATGGTCAGAATGCCGGAAGTCGAAAACCAGGCGACGCATATTTGGACAAAAAATATTCACTGGTTGGAGGCAACAAGAATTGCTATCAAGATTATTTTGCCACGTAGCGCAGGACCGTAAAACTACTTTAGTTGAGATTTCGAGGAATTTTGGGGAGGGAAAGATGCCATTTGAAGATTACGTATTTGCTCTAAAGGATGCTGTTGGCATTGACTTCCTTATAGCTGCAGTAGCTATTGGCCAAGGGAAGCATGATCTCACAGGCACTGCTCTTGAGCCACCAAAGACGAATCACATATTTTCTGTTCGCCACGAAATGCCAGCCGGCAAAGCTTGCTCCTCGCTTGCACCTGCAGATATAATCAAAATTCTAACAGGAGATTTTAGATTAAGTAAAGCTCGATCCAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAACGGTTGGCGTTCTGAAGAGCCAAAGGATAATTATGTTTCTGGAACAAAACAAACTTTGGTTTTTCTTGTACCTGGTATTAAGAAGTTTTCAAGAAGGAAACTGGAAAAAGGTAAGCAATACTTTGATTCTATAAGTGATGTACTGAATAAAGTGTCATCTAACCCTAAGCTTCTTGAGACTGAAATTCAAGCAACTGAGGGTATTGTAGATAAGGAAAACatgcaaaacaaacaaaaccaagATGGTGTGTCAAATACACATCAATGTCCTTCGTTTCAATCTCACAATTCAAAGTGCAAACCGGATCCCGTGAAATTTACAATTGTAGATACCAGCATAGTTCATGATACTAATCGACGTAAAGTGAGACAGATGAAAAGCTTACCTTTTCAACCTGCGAATATATCTACCATCTCAAGCTGCAGTTCTAGTGAATCTGAGACAACTACATCTGAAGACTCGGAATATCAAATTGAGGAAGCTAATGCTTCAAGTCCTACTGAAGTTCAGGTTGAACAAGCTAATTCCTTGCACCGTGCTGAAGATCAGGTTGTACACGCTAATTCTTCACACTGTGGTAAAGATCAGGTTGGACACACTAATTCTTTACACCATGCTGAAGATCAGGTTGTACACGCTAATTCTTCATACCGTGCTGAAGATCAGGTTGGACACGCTAATTCTTCACACCGTGTTGAAGATCAGGTTGGGCCCGCTAATTCTTCACACCGTGTTGAAGATCAGGTTGGGCGTGCTAATTCTTCTGACCATGTTGAAGATCAGGTTGAGCGTGCTAATTCTTCAGACCGTGTTGAAGATCAGGTTGCGTGTGCTAATTCTTCAGACCGTGTTGAAGACCAGGTTGAGCATGCTAATTCTTCAGACCATGTTGATCATCAGGTTGAGCACGCTAATTCTTCATATCGTGTTGAAGATCAGGTTGAACATGCTAATTCTTCATACCGTGTTGAAGATCAGGTTGAACATGCTAATTCTTCATACCGTGTTGTAGATCGGGTTGAGCAAGATAATGCTTTAAGTCCTATTGAAGATCAGGCTGAATGTACTAATTCTTCATACCGTGTTGAGCATGCTAATTCCGACAACAATGTTGAAGAAATCTCAGATAAGGGGATGCACATAGACTCATCAGGTCATGCTCATAATCCTGAGACCCTCAACACCACGGAAGTAGAAGTAGAAAATTATAAATGCCATTCTGATCTGCCCGATGATGAGCATTCAAGGGAGATGAATGAGCAGCCATTGATTCAAAAGATGACATCTGATGATTGCACAAAACCTTTTCCCTGCACCACAAAAATGCAGGAGTTAAGAGCCTGTAGCCACAGAGAGTTTGACCTAAATGCTGAAGATACTTCTATGGAcagaaattttgatttaaatgagCCATTTTCACCGTCAAATCCACATGCAGCATCTGAGGGCATGGATTTTTCTGTAGGTTTAGAAACTTTGTCTTTCCCGAGTTATCCGGCTAAAAGCAGTCCAAATATGAGCCATGAAGGCAGTGTCACTGAGAATCACCAGGCTGGAGAAGGTTCTGCGAAAAATTCTGAAACCAGGATGTTGATCGACTTGAATTTTCCTCAAGTTCCACCTGACTTATCACTTGAAATGGAAATACCGTCCTCTAAGGCAATACAGCTAAATGATGACCAATGGGCGCATACATTGTCATCTTCATCTGAGACAACCCAGCTCAACGTGAAACCAGAGATTCCTGATTTAAATAAGGAGCACCAACCAAGCATTGTTAACCGCCGTCAAAGTACAAGGAACCGGCCATTAACTACAAAGGCATTGGAAGCTCTTGAGTACGGATTTCTCAACTcaaagaggaagaggaagaacaCAGAATCTTCAGACAATAATTCAAAGTCCCAATGTTTACGTCCAAGTAATGAGACAATTATCGATGTTACTTGTGATAATAGCATTGGGAACTCTATGGCTGATACAAGTGCAAAGGAGGAGAATGTTATAAGGGAATATAGTTTCATTGTTTAG 3051 0.4002 MEEDDELGEPEVVPRVGDEYQAELPPFTAEPYFSQLVKRKGDSEIAENMSDSFLVALPLPLMWTHSEFGRSCGGGETLESVTSQKGRGICEGKNVGGFPNFKSSYRNVETDIGSCPELRTELDQPRNKYLLPELLGCQSWTDIEYNSFLLGLYAFGKNLNFLKRFVGTKSMGDILFFYYGKFFRSKGYSRWSECRKSKTRRRIFGQKIFTGWRQQELLSRLFCHVAQDRKTTLVEISRNFGEGKMPFEDYVFALKDAVGIDFLIAAVAIGQGKHDLTGTALEPPKTNHIFSVRHEMPAGKACSSLAPADIIKILTGDFRLSKARSSDLFWEAVWPRLLANGWRSEEPKDNYVSGTKQTLVFLVPGIKKFSRRKLEKGKQYFDSISDVLNKVSSNPKLLETEIQATEGIVDKENMQNKQNQDGVSNTHQCPSFQSHNSKCKPDPVKFTIVDTSIVHDTNRRKVRQMKSLPFQPANISTISSCSSSESETTTSEDSEYQIEEANASSPTEVQVEQANSLHRAEDQVVHANSSHCGKDQVGHTNSLHHAEDQVVHANSSYRAEDQVGHANSSHRVEDQVGPANSSHRVEDQVGRANSSDHVEDQVERANSSDRVEDQVACANSSDRVEDQVEHANSSDHVDHQVEHANSSYRVEDQVEHANSSYRVEDQVEHANSSYRVVDRVEQDNALSPIEDQAECTNSSYRVEHANSDNNVEEISDKGMHIDSSGHAHNPETLNTTEVEVENYKCHSDLPDDEHSREMNEQPLIQKMTSDDCTKPFPCTTKMQELRACSHREFDLNAEDTSMDRNFDLNEPFSPSNPHAASEGMDFSVGLETLSFPSYPAKSSPNMSHEGSVTENHQAGEGSAKNSETRMLIDLNFPQVPPDLSLEMEIPSSKAIQLNDDQWAHTLSSSSETTQLNVKPEIPDLNKEHQPSIVNRRQSTRNRPLTTKALEALEYGFLNSKRKRKNTESSDNNSKSQCLRPSNETIIDVTCDNSIGNSMADTSAKEENVIREYSFIV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 588 612 - -
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 589 610 - -
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 960 980 - -
Tsu07g04207 1016 ProSiteProfiles SANT domain profile. 135 186 IPR017884 -
Tsu07g04207 1016 PANTHER ATROPHIN-RELATED 619 1010 - -
Tsu07g04207 1016 PANTHER ATROPHIN-RELATED 3 666 - -
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 411 437 - -
Tsu07g04207 1016 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 619 1010 - -
Tsu07g04207 1016 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 3 666 - -
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 563 582 - -
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 477 508 - -
Tsu07g04207 1016 MobiDBLite consensus disorder prediction 839 865 - -
Tsu07g04207 1016 SUPERFAMILY Homeodomain-like 139 186 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04207 Tsu-Chr7 47712992 47717325 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04207 - - var:108329239 980.319