Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04200 atgatttcTGCTAAGGATAGAGATGGAATAAAGggattagggttagggttagggttaggtAGTAGAAGGAAAGAGATGTTGGAGTTTGAGCTTGAAGAAGGTGAAGCTTGTTCATATCAGAAACGTGAAGATTATGATGCCACCGTTGATCCAGATGTTGCTCTCTCTTACATTGACGACAAAATTCAAGATTACCTTGGACattttcaaaaagattttgaagGTGGCGTGTCTGCAGAGAATCTGGGGGCAAAATTTGGTGGTTATGGTTCGTTTTTGCCTACCTATCAGCGTTCTCCTGCTTGGACTCATCCAAGGACTCCGCAAAAAAATCACAGTCAAAATTCACCCAGATCTCCTAATAACATGCACTCGGAGAGTGGACAAGGGGATGCTGTACAATTATCGAGACTTGGCCCAGGTTCTGCTACCTCCTCGAGGCTGGCTGCAATTAAGGGACTCTCTTTAGATGATGGAACCAGTCATGAAAAATGCATGTCAATCACTAATGCCGAGGCATTAAATTCTAAATATGAGTCTCTAAACAGGAAAAATGCTAGCACATCAGACCAGAAGACATTGAAGGTTCGTATCAAAATGGGTACTGATGATTTGTTAACACGGAAAAGTGCAGCAATATACAGTGGACTTGGTCTAGACGTGtcaccatcatcatcactgGATGACAGCCCCTCAGAAAGTGAAGGAATTTCTCGTGGTCCTTTGGATGCTCCCTTTGAATCTCCGACCAGTATCCTTAAGATTATATCAACCCTCCCTAAGCTGTTGTTGCCTCTTCCTGATGATCTCACTGAATTAACTGAGAAGGAAGTGCGAACCAGAGATTCCATCCCCGGTCCTGTTCATACGGATGACCCAGAAAGTTCTGGTATGCTACTAAATGAATCTAATATTGTAAAAGGTGACAGAAAATTGTTAGGAGGGAAAAAAGTGAAGTCCCTAGAGGGTTACGAGCCCTCAATGGAATTCAAGGGTTGTAGTAAGAAGAATACTCGTAATGATGTTGGAGGGCCGTCAAAGAAAGAACAAGGTGAAGATGCAATGACTATGGAGGAACTAGTTTCAAAAACCATGAAACTTCCACTTTTGTCCAATTCATATTCTCTCGGTGATGACTTGGTAAAGAATGTAGATGGGCCATGTAATAATTCATTAAAGGAAGCCAAGAAGGGTGTGGTGAAGGAGAAAACCTTGTCGGACCAAGCACGAAAGGAACAGGTTGATCAAGCATCTGCCGAAGTGAATGGTTTTTCTGAAAGGGCAAAAGGAGGTTCTGGAAGAAAAGCTGTGGGAGATAAGGTTTTGCTCGATGACACAATAGTAGCTGAATCTAATGTTTCCAAAGTTAGGACAACATCAAGCACTGAATGCGTAGAGCCTCCTAAGAAGGCTAGTCAGAGAGATAGCCTGGGCGAACAAGACAGTGCGTCATTGCCTTTTGTGACAGAACATCCATATCCTGGAGGGAAGAAGAAGTCAAAGGGAATTCATGACACCATGATTATAGAGAGGGAACAAGAAAATATGAAGGATGGAGCCTCTTTTATTCCCAAAACAAAAAGGGGTTCTGATGATAGTTATACATCAAAAAACGAAATTGAAGACGTCAAACTACGGAAGGGTCCTGGAAAGGCTAGAGAGGCTTATAGAGAATTCTTTGGAGAGTTGGAAGAAGATGAGGACGGGATTGATACACCGGAAACATCTTATGAAGATAAACCGAAAGAATCTGAAAGGGTTGAGAGAAGCGCTCCGGAAACAAATCTTGGAGCAAAGGAGACATCCGGTGGTAAGAAAGTTGACAAGTCATTGACACAAGTATACCCTAACACAGCCACAAATGTGAACGGAAATGGGGTTCCTGCAATGTTGCCTCCTGTTGAGATGAAAGATAATTGGGTACAGTGTGACAGATGTCATAAATGGCGTATTCTTCCTGCTGGCACAAATCCTGATAGCCTACCCGAGAAATGGCTTTGTAGCATGCTTAATTGGCTGCCTGACATGAATCGATGTAGTTTTAGTGAGCATGAAACTAATATAGCCCCTTTTTCTGTATACCAAGGGCATCCTCTCGATGCTCAAAGCAACCTGCAAAATGGCTCAGGTAGTGTTATGGTGGGAGGAAATGGGGCAACTTTTCAGCATCCTGGTCAACGCCATCCAAGTAGTGATATGCACGGTGTGCCTGGTGGGAAGAAAAAAGTTGCGAAAGAAATATCAAATTCTTCAAATAAAGATGGCACTTCTCAATTTACACATTCtataaagaaaaacatacaGTCATCAGTGAAAAGTAGGAGCTTAAATGACGTGAACAAATCTCCTGTTGTGGGTGAGGCTGATGCTTCAGGGGAGAAACACAAAAACAAGCCAAGGATGCTGGAGTACAATTCTGATAGAGGTGATACGAAGAATATGAAAAGCAGGAGGGATCCTGATCAAGATTATTCGAGGCCATCCAAGAAAAGTAAGACTGACAAGGTTCATTCTATTGATAAAGAGTGGATTCCAGAACAGAATGGAACCGCTAGGAAGGTCAGTCATAGCTCAAACAACGGTTTGCCAACTGCTTCAGCTGGCAAAGATCGGCCTAGACAGAAAGACCACTCCTCATCGAGTGACTCCAAACTCAGAAAGGACAGGCCACCAGTTTCTGctgagaagagaaagaataagGGTCAGGATTCCAAGAATGAGGGGTCCCTGGATTTGGAGAATTGTTCCATTGGTAGTGTAAAAAAGAGGAAATTGAAGGAGTATCAGGATGCTCAAGCTCATAGCACTGGTAATCCTCGCCTACACGAGAGTAGAATTTCCGAGCAGGAGTTCAGTGATTCCAGGAAggaaaagaaagcaagaaattCAAGATCTGAAGGCAAAGAGTCAAGTGCCAGCAAAGGCAGCGGCAGGCCTGACAAAAAAGTTAGTCATACAAAGAACCAGAAATTCAGGCAAAATCCTGGAAGCAATCATTCACATCGGAGCATGGATGGCATGGACAGTTCGAAGAGGGACTTGGGATCTGTACAGGTTTCTGTTGCGGCTACTTCAAGCTCTTCTAAGGTCTCTGGCTCACATAAAACCAAAGCCGGCTTCCAGGAAGTGAAAGGCTCCCCTGTGGAATCAGTTTCTTCCTCACCTTTAAGAATTTTAAGTACAGATAAGTTTTCAAACAGAGAAATTATGGTGAAAGATGAGCCTCATGATACTGCTGCTGTGGATAGTCCAAAAAGATGCTTAGATGGGGAAGATGATGGTGCAAGTGATCGATCAGAAACGGCCAGGAAGGACAAATCTTTCACCATGACACACAGGTCTGATTTTCAGGGCAAGGGTGGTGGTAATCACATGTCAGATACGAAGCCTAAAGCCCAAACAACCAGCCATTGTACCAATGGTGGTGTGGACACTATGGCCCACGATGGGTCATATCCAAGAGAGCAGATTAAGCATCATGGTGAAGACAAGACTGGTGTTTATTATGCTAATGTGTCTCATGCAAGGAAAACTGGCACGGAATCAGGTTTGGAGGAAAACAAGCAGGTCTGCAAGTCAGAGCCCTTTGCAGGAAAAGTCAAGAGTTCTAGTTCTCCTAGTCAACTGCCAGACCAGTCTCCTCTGCGTGAGACAAAACGTGTGGATGGAAAAGTTAAGTTGCAGGAGAAGTTTGAGCTTAAGCCTGACCAGAATGAAACTGTACATGCTAGCAAAAAAGACATCACAGGAAAAAATGGAAGTAGGAAAAAAGAGAATCATGTAAAGAGAGAGCATGACGTTCAAGAGGTTAGTATCGATGCCCTAAGCAAAATGGAACCATTGCATGCTCCCACTAAGAATCAGTTGGCAGACTGTGATACCGAAAGACCTTCAAAGAGGTCCCTTTCGGAAAGACCTGATCAAGAAGTGCTTGGTAAAGGGAAGTCTCAAGTTGAGACTTTGAATCACTGTCCACGACCAGTCGTTGGTTCCCACAAAGGGAATGGAGATATGGAAGTTGACCCGTCCAAAGCTGATGATGCGTCAAAGCTGCAAAAAAAGCAATTCAAAAAGGCTGATCATCAAAATGGAACTCCACAAGTTGGCTCCAAAAATCCTGCACTTAATGGACACAGATCCAAGGAGCTTGATGCCCCTAGTCCAGCTAGAAAGGATTCTTATAGCCATGCTGCTAACAATGCTGTGAGAGAAGCTAAAGATCTTAAGCACCTGGCTGATCGTCTTAAGAATTCTGGATCCACTCTTGAGAGCACTAGTCTATACTTCCAGGCAGCTCTTAAGTTTCTTCATGGTGCCTCTCTATTGGAATCTGGCAACAATGATAATGCTAAACACAGTGAGATGATTCAATCAAAGCAGATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCACAGAGGTCGCATATATGAGGGTTATATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCAGACAGCCCTGCAAATGACTCCTCTTGGTGAATCTCCATCATCATCAGCCTCTGATGTTGACAATGTTAACAACTCTACAGCAGCTGACAAAATTGTCCTATCCAAAAGTGTCAATTCACCCCAAGTTGCTGGAAACCATGTTATTGCTGCACGAAGTCGGCCAAATTTTGTGAGGATACTTAATTATGCCCAGGATGTGAATTTTGCCATGGAAGCCTCGAGGAAATCACGGAATGCTTTTGCAGCTGCTAATGCAAGCCTTGCCGTGGGCAAGAATGCAGATGGTGTTTCCTCTATCAAGAAGGCCCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTACGTTTGGTACGGCTTGCTGTGGAGGCCATTAATCGTTAA 4926 0.4267 MISAKDRDGIKGLGLGLGLGSRRKEMLEFELEEGEACSYQKREDYDATVDPDVALSYIDDKIQDYLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPAWTHPRTPQKNHSQNSPRSPNNMHSESGQGDAVQLSRLGPGSATSSRLAAIKGLSLDDGTSHEKCMSITNAEALNSKYESLNRKNASTSDQKTLKVRIKMGTDDLLTRKSAAIYSGLGLDVSPSSSLDDSPSESEGISRGPLDAPFESPTSILKIISTLPKLLLPLPDDLTELTEKEVRTRDSIPGPVHTDDPESSGMLLNESNIVKGDRKLLGGKKVKSLEGYEPSMEFKGCSKKNTRNDVGGPSKKEQGEDAMTMEELVSKTMKLPLLSNSYSLGDDLVKNVDGPCNNSLKEAKKGVVKEKTLSDQARKEQVDQASAEVNGFSERAKGGSGRKAVGDKVLLDDTIVAESNVSKVRTTSSTECVEPPKKASQRDSLGEQDSASLPFVTEHPYPGGKKKSKGIHDTMIIEREQENMKDGASFIPKTKRGSDDSYTSKNEIEDVKLRKGPGKAREAYREFFGELEEDEDGIDTPETSYEDKPKESERVERSAPETNLGAKETSGGKKVDKSLTQVYPNTATNVNGNGVPAMLPPVEMKDNWVQCDRCHKWRILPAGTNPDSLPEKWLCSMLNWLPDMNRCSFSEHETNIAPFSVYQGHPLDAQSNLQNGSGSVMVGGNGATFQHPGQRHPSSDMHGVPGGKKKVAKEISNSSNKDGTSQFTHSIKKNIQSSVKSRSLNDVNKSPVVGEADASGEKHKNKPRMLEYNSDRGDTKNMKSRRDPDQDYSRPSKKSKTDKVHSIDKEWIPEQNGTARKVSHSSNNGLPTASAGKDRPRQKDHSSSSDSKLRKDRPPVSAEKRKNKGQDSKNEGSLDLENCSIGSVKKRKLKEYQDAQAHSTGNPRLHESRISEQEFSDSRKEKKARNSRSEGKESSASKGSGRPDKKVSHTKNQKFRQNPGSNHSHRSMDGMDSSKRDLGSVQVSVAATSSSSKVSGSHKTKAGFQEVKGSPVESVSSSPLRILSTDKFSNREIMVKDEPHDTAAVDSPKRCLDGEDDGASDRSETARKDKSFTMTHRSDFQGKGGGNHMSDTKPKAQTTSHCTNGGVDTMAHDGSYPREQIKHHGEDKTGVYYANVSHARKTGTESGLEENKQVCKSEPFAGKVKSSSSPSQLPDQSPLRETKRVDGKVKLQEKFELKPDQNETVHASKKDITGKNGSRKKENHVKREHDVQEVSIDALSKMEPLHAPTKNQLADCDTERPSKRSLSERPDQEVLGKGKSQVETLNHCPRPVVGSHKGNGDMEVDPSKADDASKLQKKQFKKADHQNGTPQVGSKNPALNGHRSKELDAPSPARKDSYSHAANNAVREAKDLKHLADRLKNSGSTLESTSLYFQAALKFLHGASLLESGNNDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCTEVAYMRVIYSSHTSASRDRHELQTALQMTPLGESPSSSASDVDNVNNSTAADKIVLSKSVNSPQVAGNHVIAARSRPNFVRILNYAQDVNFAMEASRKSRNAFAAANASLAVGKNADGVSSIKKALDFSFQDVEGLLRLVRLAVEAINR 1641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 220 245 - -
Tsu07g04200 1641 Pfam CW-type Zinc Finger 639 684 IPR011124 GO:0008270
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 280 299 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1013 1035 - -
Tsu07g04200 1641 ProSiteProfiles Zinc finger CW-type profile. 634 687 IPR011124 GO:0008270
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 702 716 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 454 501 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1215 1272 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 574 593 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1292 1312 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 749 780 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1067 1151 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 941 987 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1067 1112 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 99 141 - -
Tsu07g04200 1641 Coils Coil 1398 1418 - -
Tsu07g04200 1641 PANTHER CW-TYPE ZINC FINGER 28 1639 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 850 865 - -
Tsu07g04200 1641 Gene3D - 632 688 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1198 1214 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1176 1395 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1127 1142 - -
Tsu07g04200 1641 PANTHER CW-TYPE ZINC FINGER 28 1639 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 332 354 - -
Tsu07g04200 1641 Coils Coil 171 191 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 702 1054 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 788 842 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 1337 1360 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 561 606 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 869 907 - -
Tsu07g04200 1641 MobiDBLite consensus disorder prediction 989 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04200 Tsu-Chr7 47650929 47658832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04200 - - aprc:113860968 2274.97