Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04198 ATGAACAGCTTAACAGCGAGCTTCACCGCTCGAATATACGGCACACGCCGCGAAGAAATTCCGTTACGACACCGTTCGATTAACCAATTCATTAACAGACGCGTCACTGTTCTTCCCACCAGAACCAATCTCATTTCCACAAGATTCGTCTGCATGGCGGAACCTTATCTTTTATTGAAGCTTGAATCTGCTGAGAAAACTTGGAAAGAATTATCGGTGAAGCTTGCTGATCCAGACGTTGTTTCTAATCCTAGCGAGTATCAGAAGATAGCACAATCGGTGTCAGAACTTGACGTGGTTGTGTCCATGTATCAGAAATTTAAAGACACTGAGAAGATGCTTGAAGAAGCCAAAGCTTTATCAAAGGATGATGGCAATGACGAGGATATGGCAGAAATGATATCTTACGAAATTGAATCTTTGTCCAAGCAACTTTCAGAGCTAGAAGACAAGCTGAAGGTTTTACTGCTTCCCAGTGATCCTCTGGATGCAAGAAACATAATGCTTGAAGTAAGAGCAGGTACTGGTGGCGATGAGGCTGGGATATGGGCTGGTGATCTTGTACGAATGTATGAAAAGTTTAGTGAACGTAATTCTTGGAAGCATTCTGCCATCTCATTCTCTGAGGCAGAAAAAGGGGGATTCAAAACTTATGTGATGGAGATTAAAGGAAATCGTGTCTACAGTAAATTAAAATACGAATCTGGTGTTCATCGAGTTCAACGTGTTCCTCTAACAGAAACACAGGGCCGCGTACATACTTCTACTGCAACAGTGGCCATTATGCCAGAGGTTGATGAAGTTGAAGTCACAATTGACCCGAAAGATATTGAAGTGACAACGGCACGTTCTGGGGGTGCTGGAGGCCAGAATGTTAATAAGGTTGAAACGGCAATTGATCTTGTTCATAAACCAACGGGAATCCGCATCTTTTGTACTGAACAAAGGACTCAGATTCAGAACAAGAATCTTGCTTTTAAGTTACTGCGAGCCAAACTTTATGAGATAAAGGTAAGGGAGCAGCAAGAGTCGATACGAAATGAAAGAAAATCACAGGTTGGTACAGGAGCACGTGCAGAAAAAATCCGGACATACAATTTTAAGGACAACAGGGTTACTGACCACAGATTGAAGAAGAACTTTGAGCTCACCTCTTTTCTAGGTGGTGACATAGAGGATGCTGTTCAGGTATATTCTGTAACACACTTCTGGTGGTATGTATATTAA 1227 0.4214 MNSLTASFTARIYGTRREEIPLRHRSINQFINRRVTVLPTRTNLISTRFVCMAEPYLLLKLESAEKTWKELSVKLADPDVVSNPSEYQKIAQSVSELDVVVSMYQKFKDTEKMLEEAKALSKDDGNDEDMAEMISYEIESLSKQLSELEDKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYEKFSERNSWKHSAISFSEAEKGGFKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEVDEVEVTIDPKDIEVTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEQRTQIQNKNLAFKLLRAKLYEIKVREQQESIRNERKSQVGTGARAEKIRTYNFKDNRVTDHRLKKNFELTSFLGGDIEDAVQVYSVTHFWWYVY 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04198 408 Gene3D - 169 395 - -
Tsu07g04198 408 Pfam PCRF domain 65 259 IPR005139 GO:0006415
Tsu07g04198 408 Pfam RF-1 domain 266 376 IPR000352 GO:0003747|GO:0006415
Tsu07g04198 408 PANTHER LD18447P 7 398 - -
Tsu07g04198 408 Gene3D - 51 161 - -
Tsu07g04198 408 TIGRFAM prfA: peptide chain release factor 1 53 396 IPR004373 GO:0006415|GO:0016149
Tsu07g04198 408 SMART PCRF_a_2 119 234 IPR005139 GO:0006415
Tsu07g04198 408 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 283 299 IPR000352 GO:0003747|GO:0006415
Tsu07g04198 408 SUPERFAMILY Release factor 66 399 IPR045853 -
Tsu07g04198 408 Gene3D - 265 360 - -
Tsu07g04198 408 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 7 398 - -
Tsu07g04198 408 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04198 Tsu-Chr7 47628203 47635776 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04198 K02835 - gmx:100777225 646.736