Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04185 ATGGGAAATCAATCTAAGGGGAGTGTTGATGAAGTTCAAAGTGATGTGAAGGTTGTGGAGATGAAAACTATTTGGAGGAGTAGTGTTTATGATGTCTTGTTGAGGGTTTTTGCCTTTTTGCTTACTCTAATTGCTACTATAATTGTTGGTGTTGATAAAGAGACTAAGATCATTTCATATGCTGAATTGCAATTCAAAGTTAGTGCTAAGTGGGAATATATGTCTGCTATTGTgtttttcttgGTATCAAACGCTATAGGATGTTCATATGCAGCAATTTCTATGGTGATTTCAACAATTGCAAGAACAAGTGGAAACAAAACAGCACTGTTGATGATAACAGTACTAGACATTATCATAATGGCATTACTCTTCTCAGCCAATGGAGCAGGTGCTGCAGTAGGAGTGTTAGGACAGAAAGGAAACTCACATGCACAATGGATGAAAGTGTGCAATATATTTGATGCTTATTGTCGTCACATGACTGTTGCTTTGGTTCTTTCTATCATTGGTTCCTCTGTCTTCCTTTTGATTGTGGTTCACTCAGTTTTCAAACTTCATTATTATAGATCAAACTAG 579 0.3592 MGNQSKGSVDEVQSDVKVVEMKTIWRSSVYDVLLRVFAFLLTLIATIIVGVDKETKIISYAELQFKVSAKWEYMSAIVFFLVSNAIGCSYAAISMVISTIARTSGNKTALLMITVLDIIIMALLFSANGAGAAVGVLGQKGNSHAQWMKVCNIFDAYCRHMTVALVLSIIGSSVFLLIVVHSVFKLHYYRSN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04185 192 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 10 188 - -
Tsu07g04185 192 Pfam Casparian strip membrane protein domain 28 172 IPR006702 -
Tsu07g04185 192 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 33 185 IPR006459 -
Tsu07g04185 192 PANTHER CASP-LIKE PROTEIN 1E1 10 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04185 Tsu-Chr7 47536583 47538480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04185 - - var:108328473 235.343