LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g04180	ATGCTGGAAGCACCAGTTATCATCATCGGAGCTGGAACTTCCGGCATAGCCACTGCAGCTTGTTTAACCAAAAAATCCATACCATTCATAATTCTCGAAAGAGAAAACTGTTTTGCTTCTCTATGGCAAAAATACACCTATGACCGTGTTCATCTTCACCTAAGAAAACAACTTTGTGAATTACCACACTTTTCATTTCCACCTTCTTATCCTCACTATGTACCTAAAAAACAGTTCATAGATTATTTAGACAATTATGTCAAAAACTTCAACATCAATCCTATGTATAACAGAGCTGTTGAATTAGCAGAGtattttgattatgatgataAATGGAAAGTTAAAGCTAAGAATAAGAATTCTGGTGAAGTTGAGGAATATTCTGGAAAGTTCTTGGTTGTTGCTAGTGGCGAAACCGCTGAACCTCGTGTACCCGAGGTTCAAGGGTTAGAAGGGTTTAAAGGGAAAGTGATTCATTCAACTGGGTATAAAAATGGAAAAGAGTTTAAAGATGAACATGTTCTTGTTGTTGGTTCTGGTAATTCTGGTATGGAAATTGCTTTAGATTTGGCTAATTTTGGTGCTAAACCTTCAATTATCGTCAGAAGTCCGGTTCATTTTCTTTCTAAGGATATGATGTATTATGCTGgggttttatttaattatttgtcaCCAAGTACAGTGGAGAAACTGGTGGTAATAGTTAGCAGGATTGTGTATGGGGATCTTAGCAAATATGGTATACCCTTTCCTCGTGAGGGACCTTTCACCATGAAGATGAAGTATGGGAAGTTTCCAATAATTGATCTGGGAACTGTCAAGAAAATTAAATCTGGAGAGATACAGGTGTTGCCAGCTGAAATAGAGAGCATAAGTGGTAACCAAGTGTTGTTCCGTGATGGAAAATCCTACCCGTTTGACTCCGTTATTTTCTGCACTGGCTTCAAGAGATCAACTCAAAAATGGCTTAAGGGAGGTGATGATCTTTTGAATGAGGATGGTTTTGCAAAGGGTGGTTTATGGAAGGGTAAGAATGGTTTGTACTGCGTTGGATTGTCAAGAAGGGGATTTTATGGAGCTAATCTCGATGCTCAAAATGTAGCAAATGATATTGCCTCCTTCATTGGTTCCTCAACATGA	1140	0.3737	MLEAPVIIIGAGTSGIATAACLTKKSIPFIILERENCFASLWQKYTYDRVHLHLRKQLCELPHFSFPPSYPHYVPKKQFIDYLDNYVKNFNINPMYNRAVELAEYFDYDDKWKVKAKNKNSGEVEEYSGKFLVVASGETAEPRVPEVQGLEGFKGKVIHSTGYKNGKEFKDEHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSKDMMYYAGVLFNYLSPSTVEKLVVIVSRIVYGDLSKYGIPFPREGPFTMKMKYGKFPIIDLGTVKKIKSGEIQVLPAEIESISGNQVLFRDGKSYPFDSVIFCTGFKRSTQKWLKGGDDLLNEDGFAKGGLWKGKNGLYCVGLSRRGFYGANLDAQNVANDIASFIGSST	379

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g04180	379	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	169	193	-	-
	Tsu07g04180	379	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	5	27	-	-
	Tsu07g04180	379	SUPERFAMILY	FAD/NAD(P)-binding domain	171	374	IPR036188	-
	Tsu07g04180	379	PANTHER	FLAVIN-CONTAINING MONOOXYGENASE	3	376	-	-
	Tsu07g04180	379	SUPERFAMILY	FAD/NAD(P)-binding domain	6	213	IPR036188	-
	Tsu07g04180	379	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	3	376	-	-
	Tsu07g04180	379	Pfam	Pyridine nucleotide-disulphide oxidoreductase	7	204	-	-
	Tsu07g04180	379	Gene3D	-	2	378	IPR036188	-
	Tsu07g04180	379	PIRSF	FMO	3	323	IPR000960	GO:0050660\|GO:0050661
	Tsu07g04180	379	PRINTS	FAD-dependent pyridine nucleotide reductase signature	173	191	-	-
	Tsu07g04180	379	PRINTS	FAD-dependent pyridine nucleotide reductase signature	6	25	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu07g04180	Tsu-Chr7	47489662	47494964	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g04180	K11816		-	gmx:100777958	615.15