Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04139 atgacaacaaaaCCCACCAATCTCTTAACAACAAAACCTTCACCATTAACAACAATGGTAACACTCTTAATCCTATGTATTCTTGGTTTCTACACTTTTCATTTCCCACactctcttctttcttcttcaaacaaATCAACCACAATACAAAACCTCTTTCTCTCATCTTCTTCAAACTCCACCATATCTTCTTACCTCCGCACCCTTACCATGCACCCTCACCTCGCTGGAACAAAACCCAATTCCGACACAGCACTTTTCATTCTCAAACACTTCACTTCCTTAAACCTTAAAACCCACAAAACATCATACAAAACACTTCTCTCCTACCCATTACATTCTTCTCTCTCTTATCATTTCAAAAACGGTTCTTTCATTAATCTTCCTTTAACTGAACCATCTGAACCCGGTTCAGACATGGTTCATGCTTACCACGCTTATTCACCTTCCGGTTCAGTTTATTCTAAACCGGTTTTCGTTAACTATGGTAGAGATAAAGACTATCGTTCACTTGTTTCACTTGGTGTTAATGTTAAGGGATGTATAGTGATAGTGAGAAAAGGTGGTGGTTTAGGGAGGAATGCGGTGGTTGAAAAGGCTGAGAAAAATGGGGCTGCGGCGGTTTTAATTTACAATGATGAAGTTGACACGTGGTGTAATGGGTTTGAGAGAGGTCACGTGATGAAGGGTGTAGGGGACCCATTGAGTCCTGGTTGGGGTAGTGTTGAGGGTAGTGAGAGATTAAGTTTGGATGATAATGAAGTTTTGGAAAGGTTCCCTAAAATTCCTTCTATGCCAATTTCTGTTGATGTTGCTGATGCTGTTTTGTCTTCACTTGGTGAATCTATGGTGCCCTTAGAATGGAGGAGTACCCTCAGAATTAAGGGTATTACACATGTTGGTCCTGGTCCCACTATGCTTAATTTCACCTACCTGGGTGAAAAGAAGGTAGCCACTATTCAGAATGTTTTTGCTGTCATAAAGGGATCAGAAGAACCCGATCGCCATGTTCTGCTTGGGAATCATAGAGATGCATGGACTTATGGTGCTGTTGATCCTAGCAGTGGGACAGCTGCCCTACTCGACCTTGCTCGGCGATACTCTATTCTACTTGCTTCAGGATGGAAGCCAAGGAGAACAATCGTTCTCTGCAGTTGGGATGCCGAGGAATTTGGCATGATAGGATCCACCGAATGGGTTGAACAAAACCTGATCAATTTGGGTTCCAAAGCTGTAGCGTACCTTAATGTTGATTGTGCTGTTCAAGGCCCTGGTTTCTTTGTTGGCTCGACTCCTCAGCTAGACAGTCTTATTCGCGATGTCACGAAAAAGGTCAAGGATCCCGACTCTGAGGGTGTATCAGTATACGAGACTTGGGCTGCGTCCGATGTAGGAAATAATATTCAAAGGCTCGGTAGAGTTGATTCTGATTTCGCTCCGTTTGTGCAACATGCCGGGGTTCCATCCGTTGATATCTATTACGGAAAAGATTTTCCTGTCTATCACACTGCTTTCGACTCCTATAACTGGATGGCAGAATATGGAGATCCATTCTTCAAGCGCCATGTTGCTGCTACTGGAATTTGGGGCCTTTTAGCCCTTCGCCTGGCTGATGATTCCGTTCTTCCTTTCGATTACTTATCATATGCAAATGAGTTACAGTTGTACCGGGACAAATTGAGCAGCATGTTAGACCATAAAATTTCTCTGCATCCGTTAACCACGTCAATAGAAGAATTTGCTTCTGCTGCCAAAGAAGTTGACAATGAACTAAAGGAACTTAGATTGCTAGAAACCACAGATCAGTTTGTTGATATGAAAAGGCGAGCGATGAATGATAGATTGATGCTTGCCGAAAAAGGCTTCCTTGATGGAGATGGACTTGAGGGAAAACAGTGGTTCAAGCATCTTGTGTTTGGGCCTCCGAACGACGCTGAGAAGTTGGATTTTTTTCCCGGGATCGCTGATTCTATGACTAGGTCGACTGACACAAATAAAAGAGAAAGGCTAGCAGATATTCAACATGAGATCTGGAGGGTTACAAGAGCTATTCAAAGAGCTACTTCTGCACTGAGAGGAGAATTCACCTAA 2091 0.4242 MTTKPTNLLTTKPSPLTTMVTLLILCILGFYTFHFPHSLLSSSNKSTTIQNLFLSSSSNSTISSYLRTLTMHPHLAGTKPNSDTALFILKHFTSLNLKTHKTSYKTLLSYPLHSSLSYHFKNGSFINLPLTEPSEPGSDMVHAYHAYSPSGSVYSKPVFVNYGRDKDYRSLVSLGVNVKGCIVIVRKGGGLGRNAVVEKAEKNGAAAVLIYNDEVDTWCNGFERGHVMKGVGDPLSPGWGSVEGSERLSLDDNEVLERFPKIPSMPISVDVADAVLSSLGESMVPLEWRSTLRIKGITHVGPGPTMLNFTYLGEKKVATIQNVFAVIKGSEEPDRHVLLGNHRDAWTYGAVDPSSGTAALLDLARRYSILLASGWKPRRTIVLCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLIRDVTKKVKDPDSEGVSVYETWAASDVGNNIQRLGRVDSDFAPFVQHAGVPSVDIYYGKDFPVYHTAFDSYNWMAEYGDPFFKRHVAATGIWGLLALRLADDSVLPFDYLSYANELQLYRDKLSSMLDHKISLHPLTTSIEEFASAAKEVDNELKELRLLETTDQFVDMKRRAMNDRLMLAEKGFLDGDGLEGKQWFKHLVFGPPNDAEKLDFFPGIADSMTRSTDTNKRERLADIQHEIWRVTRAIQRATSALRGEFT 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04139 696 Pfam Peptidase family M28 322 509 IPR007484 -
Tsu07g04139 696 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 36 696 IPR039373 -
Tsu07g04139 696 SUPERFAMILY Zn-dependent exopeptidases 58 541 - -
Tsu07g04139 696 Coils Coil 577 597 - -
Tsu07g04139 696 Pfam Transferrin receptor-like dimerisation domain 568 691 IPR007365 -
Tsu07g04139 696 Gene3D Zn peptidases 60 543 - -
Tsu07g04139 696 Gene3D - 546 696 IPR036757 -
Tsu07g04139 696 CDD M28_PSMA_like 318 544 - -
Tsu07g04139 696 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 694 IPR036757 -
Tsu07g04139 696 SUPERFAMILY PA domain 107 324 IPR046450 -
Tsu07g04139 696 PANTHER F10A2.10 PROTEIN-RELATED 36 696 - -
Tsu07g04139 696 Pfam PA domain 159 215 IPR003137 -
Tsu07g04139 696 Gene3D - 114 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04139 Tsu-Chr7 47188620 47193955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04139 K01301 - gmx:100818733 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04139 07 47188620 47193955 Tsu07g04139 07 47188620 47193955 ECH