Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04116 ATGGAAAACAGGAAAAATATTTTGCAGTATAGGGAGAGGTTGGATAAGACTCTTACCTCATTTGATCTTACAAATGATCAGAAACTTAAATCGCTTGTCGAAAGTCAATTCTGTCGTTCTTCGCAATCAGAGATGGAATTGGAAGGATATGACGAGAAACTAGAAATTAAGACTGCTGAGTTATCAAACTGTCTTGATATGATGAGAAGTGTTTCTGCAGATGAAAACGGAGGATCTAGTACATCGCACGCCGATTGGAAATTAAAACAAGATAATGAGGAGTTCCGTGTTATGTATCGCGAAGGACCAGAGGGAACTCCCTATCATACAATGATGGTTGAAGGCTATGTAGATGCACCTGTTGATGTTTCTTTATGCCTCACATGGGAGTCACCCCTTTATAAGAAATGGTGGCCTCAGTTTACTGTTCCGACTTTCAAAGTTACCGCATCTGGTTGTTTGCAGAAGGTCCAAACTGGAGAACAAATAGTACTAGTAAGGATAAAGCCTCCATGGCCGCTGTCTACAAGGGAAGCTATAGTTCATTTTTATCTGTTTGAGTACTTTCAAGATGACTTGatagttattcttttgaaatCGGTCACTGAGTTAGAGAAAATTAATGAGACTATTGATGGTTTAAAAAATGATTCTATTCCTGAAGCAAATGGTGCTGTGAGAATTGATGTGTTGGGAGGTATTGTTATGCAAAAGGTGACCTCTGAAAGAAGTTATTTCCGGGCAATAGCGAATTTGGATATAAAGATTGATTTTATGCCTCCATCCCTTATAAATTTCATTTCAAGACAAATCATTGGCAGTGGTTTCAGACTTTTTCAGAAGGCCGTGGCTTCTAAGATGAACGGCGACAAGGAATTCAGCAAGGCCTTGACAGATGTGTTGTTTGTTAGAATTCGCGAAGCTCTATACAGTACCGATGAATCAAATTCTATGGATGAGGAGGAGCTTAAGCAAGTTGCAAGCATTCTTCCTGCTGAAGAACTTAGTCAAAGTAAACAAGATCGGGTGAACGATATGTCTCGGGAGGACAAAAGCAACCAAAATGCAAATAATGATGCAAGCAGTGAAGAGATTGTACAAAGTAAGGAGAATGTAACCAAAGTTCATGACATTCCAATTGAGGAAGGTGATACATCTATTGTACTAAAGGGAAATACGAATTGTGAGATTGTCGATGTAGATAATGAAGAGATTTTAGAAGAAAATACTGGTGAGATTGTACAAATTGAAAAGGATGTAAAGAAAATACATGGCATTCcatttgatgaagatgatacATGTGTTGTACTAAAGAGAAAGAGTAATTGTGAGATTGTCGATGCAGATAGCGAAGAGATTGTAGAGGAAAATATTGAAGAGATTGTACAAATTGAAAAGGATGTAAAGAAACTAAATGGCATTCCTATTGAGGAAGGTGATACATCTATTGTACTAAAGGGAAATAAGAATTGTGAGATTGTCGACGCAAATAGTGAAGAGATTGTAGAAGCAAATATTGAAGAGATTGTACAAATTGAAAAGGATGTCAATAAAGAAAATGGAATTTCAATTGAGCATGATGATACAAAAGGTGTACTGAAGAGAAAGAGCAATGTAAATATCAGCTCAAATGTAAGGCAGGCTTTAGAAACATTAGAAAGGGCTATTTCATCGGTTAGGAAATATGGATTTCACTCGCGCAGATTCTCTTTTAGCTTTGCTAATGAAGCGACCATCGGCAAAGAAAAAGGTGGAGAATTCGATCCACATTCTGCAAAACTTTTTCAACCACCTGTGAAAAATGATGTCAGTGTCGAAGAATCAAGCAACAATATACCACGGGAAAGTTCAGATGATCTCTATGAAATTCAAAACTTCAGGCATACTGAAACAGATCCTAACATAAAGGAAGTAAATTTTAAGAAAGTAGTACCGGCTTTTCCAAATCAGAATCTCATTGAAGCAAGCCAGGTTGATTCTTATACAAGACATGATTTGTCTTCAGATGAAGCAATAAAGTCAAGCAGgcagaaaaaaataaacaacctTGTTACTCAAGGTATCTCTTCAGATGTACCAAAACAATTAAGCaagaagaaaaattatagaTACTGTTGTTTTATGCATTAG 2130 0.3592 MENRKNILQYRERLDKTLTSFDLTNDQKLKSLVESQFCRSSQSEMELEGYDEKLEIKTAELSNCLDMMRSVSADENGGSSTSHADWKLKQDNEEFRVMYREGPEGTPYHTMMVEGYVDAPVDVSLCLTWESPLYKKWWPQFTVPTFKVTASGCLQKVQTGEQIVLVRIKPPWPLSTREAIVHFYLFEYFQDDLIVILLKSVTELEKINETIDGLKNDSIPEANGAVRIDVLGGIVMQKVTSERSYFRAIANLDIKIDFMPPSLINFISRQIIGSGFRLFQKAVASKMNGDKEFSKALTDVLFVRIREALYSTDESNSMDEEELKQVASILPAEELSQSKQDRVNDMSREDKSNQNANNDASSEEIVQSKENVTKVHDIPIEEGDTSIVLKGNTNCEIVDVDNEEILEENTGEIVQIEKDVKKIHGIPFDEDDTCVVLKRKSNCEIVDADSEEIVEENIEEIVQIEKDVKKLNGIPIEEGDTSIVLKGNKNCEIVDANSEEIVEANIEEIVQIEKDVNKENGISIEHDDTKGVLKRKSNVNISSNVRQALETLERAISSVRKYGFHSRRFSFSFANEATIGKEKGGEFDPHSAKLFQPPVKNDVSVEESSNNIPRESSDDLYEIQNFRHTETDPNIKEVNFKKVVPAFPNQNLIEASQVDSYTRHDLSSDEAIKSSRQKKINNLVTQGISSDVPKQLSKKKNYRYCCFMH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04116 709 MobiDBLite consensus disorder prediction 336 377 - -
Tsu07g04116 709 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 443 493 - -
Tsu07g04116 709 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 393 445 - -
Tsu07g04116 709 MobiDBLite consensus disorder prediction 350 368 - -
Tsu07g04116 709 PANTHER START-2 DOMAIN PROTEIN 1 354 - -
Tsu07g04116 709 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 485 709 - -
Tsu07g04116 709 SUPERFAMILY Bet v1-like 81 284 - -
Tsu07g04116 709 PANTHER START-2 DOMAIN PROTEIN 443 493 - -
Tsu07g04116 709 PANTHER START-2 DOMAIN PROTEIN 485 709 - -
Tsu07g04116 709 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 354 - -
Tsu07g04116 709 Gene3D - 84 291 IPR023393 -
Tsu07g04116 709 PANTHER START-2 DOMAIN PROTEIN 393 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04116 Tsu-Chr7 47005263 47009798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04116 - - mtr:MTR_7g106640 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04116 07 47005263 47009798 Tsu01g02059 01 21096230 21100741 PCT