Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04107 ATGGATCCGGCGAGAACGCCACTCGGACAAATGCTACTTGAAGAAATCACACCGGTTGTTATGGTTCTTTCTACTCCTTCCGTCGAAGAAACTTGCTTAAAAAACGGACTCTCCTTTCTTCAGATGCTTACTCCGTTTTGCTCCTTCAACAACATCGACGTTCCAGTGAGAACCGCTAGTGATCAACCTTATCGCATTCACAAGTTCAAATTGCGTCTCTTCTATGGTTCTAATGTTAGGAAGCCTGATTTGAAGGTAGCTGAAGAGCAATTGATGCAAGTTATCACAGAATCGGGGGAGAAAGTTTTTTCCGAGTTGTGCTCAGATGCATCGAAAGTTAACCATGAACATGCGAGCTCTGAAGACAGAAATACACCATCCTGGTTTCAGTTTTTCAATAAAGAGCTTGTCCGCATGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCCGTGGCTTGTCTTTTAGCTGTTTCTTCAAAAGATGAACATCCAGTTAGCAGATTTATCGAcctttttaataccaacaagcTTCCTTCCCTTCTAAAAGATGGTGCGATGGATCCAAAGATTTTAAAGCATTACTTGTTAGTGCATGACAATCAAGATGGCTCCGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAATACATTTGGTTCAAGTGACTGTGTGCTGCTTTCTATAAATTCTTCCCTAGATGCTCCAATCAAGCATCAAGATAATCCTTGGGCTTCACAAATATGTGATGCCTCATCTAATCAAGATCTTGGTTGCTTTCTTAACATTGATGATATCAATGAGATCAAAGATTTAATGCAAGATTTATCATCTAAACACATCATTCCTAACATGGAGCAAAAAATCCGTGTGCTCAATCAACAGGTTTCTGCAACACGTAAAggttttaaaaaccaaataaagaaTTTATGGTGGAGAAAAGGGAAAGAAGATGGTGTAGATTCTCTCAATGGTCCTACGTATAACTATAACTCAATTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAACTATCGCCTAATTTCGACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGATCAATCAAGAAAAGAAGCTGAATATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATTATTGGGTCAGCAAAATGCCACACGATGTGGTCTGTGGTGGATAGAAATGTTGAAGGCACGGGATCTATTTAAGGAGGCAGCTACAGTTTACTTTCGTATTTGTGGTGAGGATATCCTACACTCTGCTGTGATGCTTGAACAAGCATCATACTGTTATTTGTTGTCTAAACCCTCCATGTCACGCAAATATGGATTTCATCTAGTTCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGGTATTGGCTGTCAACATTCCCCCCCTACTTAATAATGTTTGctttttcttattaattttatggCCTCGACGTTGTTTTGTTCAGATCAAGCATGCAATTCGAACATACAGAAGTGCTCTTACGGTTTTCAGAGGAACTACTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGAGGTAGCTGTCAAACATATGACAGAAATATTGGCCTGTAGTCACCAGTCCAAGACGACACAAGAATTATTCCTAAGCGACTTTCTTCAAGTTGTGGAGAAAACAGGGCACACATTTGAGGTAACAAAACTTCAATTGCCTGTGATCAACATCTCTTCACTCAAGGTCATCTTTGAAGATCATCGAACTTTTGGATCATCTTCAGCTGTTGACACTAAAGAAGGCTTGTGGCATTCTTTGGAGGAAGACATGATACCATCGTTTACTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGCACAATCAATCAAATGTTTGTGTTGCAGGAGAAGCTGTGAAGGTTAATATTGAATTCATAAACCCTCTGCAAATTACAATTCCCGTATCTGGTGTTACACTTATATGCAAATATTCTACTAGTACTGATGAACTTACATCAGATGCAAAAGGATCGAGTGTGAAGACTGATAATGAAGTTGACCACTTCCGGGATACGAGCTCATACAATTCCTCCTTTTTAGTATCTGAGGTTGATTTCTCACTAGGAGGTGGTGAAACTACGCTGGTTCAATTATCAGTGACTCCCAAGGAAGTAGGTACTCTTGAAATTCTTGGTGTTCGATGGAAACTATCAGGTACAATAGTTGGCTTTCACAACTTTGAGTTGAGCCACCCGAAGAAGAATATTGTAAAAGGAAGAAGGAAAGCAAAGCAGTCGCCCAAtgagaaatttaaatttatggtGATCAAGAGCATACCCAAGATTCAGGGTTCTGTCCAATCTTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTATGCTGGAGTTGAGGAATCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCACCCTAGATTCCTGATTATTGGGAATcaagaaaatgttaaattagAATTTCCTGGTTGCTTAACAAAAACGACAGATTCAGCGCAAAGTGGTGCACATGCTAATCCTAATGTCATGTCTGAAACAGTATTTTCATTTCCGGTGGACACTTCAATTCAAGGTGAAACACCCTTATCGTGGCCTCTTTGGTTTAGGGCTGCGGTTCCTGGTGATATTTCTCTTTATATGAGCATTTATTATGAGATTGAAGATATATCTAGTGTCATTAGATATCGCACTCTTCGCTTGCATTACAATGTGCAGGTATTACCATCATTAGATGTCTCATTTCAAATCAGTCCTTCTCGATTAAGAATACATGATTTTCTTGTTCGATTGGATGTTATTAACAAGACAAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCATCTGTTGGGCATCACTGGGAAATATCATTACTTCAACCTCCTGATGCTATTTTCCCTTCGCAAACGCTGATGGCTGGTCAAGCCATATCATGTTTCTTCACATTGAAGAATTCAAGGAGATTATCAAAATTGGAACACAACATATCTACCATGCCTCTCGGAAGTGATGTGTTATTGGTTCCTCAATGCAGTCAGGATTTAGTTTACAATACAAACAATGTACCTTTGGTCAATTTCCACTATTTTGAAAGATTGCAGCAGAAAGCATTGCATGAGGATCTAGGTGACTTAAATACCGTTGATTTGGTGTTGATCTATCGACCTCTCAACAGTAGCATCAGTCCTGGTTTACCCGATCCTCCTCATGTTATGTCTCACCATACATGTCACTTAAGtactGCTAGCACAGGCCCCATTTCATGGCTAGTGGATGGACCTCAAACCTTGCATCATGACTTCTCTGCATCCTTCTGCGAAATAAATCTAAAGATGCGTCTTTACAATTCATCTGACGCCACTGCTTTTGTGCACATTGACACCACAGATTTTGATGGTAGTGGGGAACATGTGAACAGTGTGAACGCGGTTCAATCAGCAACTCCTGATAACCAAGCAGGATGGCATGATGTCACACCAGTGAATGAAATCAAGGTAACTCCCAATGCTCTCGAAACCCAACAAGGAAAGGCACTATTGTTGGAAAGTGTTTCCCCATACATTTGGTCTGGATCAAGCTCGACCAACATCCACCTTGAGCCCATGTCCTCAGCAGAAATTCCTCTTCAGATCTGTGTCTTCTCTCCAGGGACATATGACCTGTCAAATTATGTTTTGAGTTGGAAACTTCCGTCCCAAGGTCTGGGAGACAGCGATGAAACGAAGCAGCATTCGGGCAAGTGCCAGGGCTATAAATACTATTTGACTGTGCTTCAGTCCACTTGA 3951 0.3953 MDPARTPLGQMLLEEITPVVMVLSTPSVEETCLKNGLSFLQMLTPFCSFNNIDVPVRTASDQPYRIHKFKLRLFYGSNVRKPDLKVAEEQLMQVITESGEKVFSELCSDASKVNHEHASSEDRNTPSWFQFFNKELVRMASFSDHEAFDHPVACLLAVSSKDEHPVSRFIDLFNTNKLPSLLKDGAMDPKILKHYLLVHDNQDGSADRASKILTEMRNTFGSSDCVLLSINSSLDAPIKHQDNPWASQICDASSNQDLGCFLNIDDINEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDGVDSLNGPTYNYNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGLLGQQNATRCGLWWIEMLKARDLFKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMSRKYGFHLVLSGEQYKKCDQVLAVNIPPLLNNVCFFLLILWPRRCFVQIKHAIRTYRSALTVFRGTTWSYINDHVHFHIGQWYASLGMYEVAVKHMTEILACSHQSKTTQELFLSDFLQVVEKTGHTFEVTKLQLPVINISSLKVIFEDHRTFGSSSAVDTKEGLWHSLEEDMIPSFTAAKTNWLELQSKLISKKHNQSNVCVAGEAVKVNIEFINPLQITIPVSGVTLICKYSTSTDELTSDAKGSSVKTDNEVDHFRDTSSYNSSFLVSEVDFSLGGGETTLVQLSVTPKEVGTLEILGVRWKLSGTIVGFHNFELSHPKKNIVKGRRKAKQSPNEKFKFMVIKSIPKIQGSVQSLPGKAYAGDLRQLMLELRNPSEFPVKNLKMKISHPRFLIIGNQENVKLEFPGCLTKTTDSAQSGAHANPNVMSETVFSFPVDTSIQGETPLSWPLWFRAAVPGDISLYMSIYYEIEDISSVIRYRTLRLHYNVQVLPSLDVSFQISPSRLRIHDFLVRLDVINKTSSESFQVYQLSSVGHHWEISLLQPPDAIFPSQTLMAGQAISCFFTLKNSRRLSKLEHNISTMPLGSDVLLVPQCSQDLVYNTNNVPLVNFHYFERLQQKALHEDLGDLNTVDLVLIYRPLNSSISPGLPDPPHVMSHHTCHLSTASTGPISWLVDGPQTLHHDFSASFCEINLKMRLYNSSDATAFVHIDTTDFDGSGEHVNSVNAVQSATPDNQAGWHDVTPVNEIKVTPNALETQQGKALLLESVSPYIWSGSSSTNIHLEPMSSAEIPLQICVFSPGTYDLSNYVLSWKLPSQGLGDSDETKQHSGKCQGYKYYLTVLQST 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04107 1316 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 664 857 IPR013935 -
Tsu07g04107 1316 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 187 490 IPR024420 -
Tsu07g04107 1316 PANTHER TRANSPORT PROTEIN TRAPP 8 1315 IPR024420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04107 K20305 - gmx:100809666 2166.35