Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04071 atgtgtaaCCGCAAAACCCTATCTGAATCAATTCCTTTTTCTCCACAATCTAATCTACCCGTTCTAGCCAGATCAGTGTGGAATCACAATCTCGAATTCGAATTCGATTTGATTCGTTCCAATATCGATTCATTTCCTCTCATTTCTATGGATACTGAATTTCCCGGTGTTATTGTCCGTGCTGATTCCGGTGACCCGTCGTTCAAGCACCGTGGTGCGTCTCTTTATGCTGTTTTGAAAGCGAATGTTGATCGGTTACATTTGATACAGATCGGTCTTACTCTCTCTGATCATAAAGGTAATCTTCCAACCCTAGGTCATGCTGCTGAATCTTACATTTGGGAATTTAACTTCAAAGATTTTGATGTGGCGCGTGATGATCACGCTGTTGATTCTGTTGAGTTGTTGAGGCGTCAAGGTATTGATTTTGAGAAGAATCGTGAGTTTGGGATTGACTCGGTTCGTTTTGCTGAGTTAATGATGGCGTCTGGTCTTGTATGTGATGATTCTGTGAGCTGGGTTACTTTTCATAGTGCTTATGATTTTGGTTATCTTGTTAAGTTGCTTACGCAGCGTGCATTGCCGGAGGATTTGGAGGAGTTTCTCCGTATTGTGAAGGTGTTTTTCGGTGATAAGGTTTTTGATGTGAAACATTTGATGAGGTTCTGCTCGAACTTGCACGGTGGGTTGGATAGGGTTTGTCAGTCGTTGAAGGTTGAACGGATTATAGGGAAGAGTCATCAGGCGGGTTCTGATAGTTTGCTTACTTTGCATGCTTTTCAGAATATCAGAGAGCTTTACTTTGGGAAAGCTGATGGGTTTGTCAAATATGCTGGTGTATTGTATGGATTAGAAGTTTGCTGa 864 0.4155 MCNRKTLSESIPFSPQSNLPVLARSVWNHNLEFEFDLIRSNIDSFPLISMDTEFPGVIVRADSGDPSFKHRGASLYAVLKANVDRLHLIQIGLTLSDHKGNLPTLGHAAESYIWEFNFKDFDVARDDHAVDSVELLRRQGIDFEKNREFGIDSVRFAELMMASGLVCDDSVSWVTFHSAYDFGYLVKLLTQRALPEDLEEFLRIVKVFFGDKVFDVKHLMRFCSNLHGGLDRVCQSLKVERIIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEVC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04071 287 Pfam CAF1 family ribonuclease 26 151 IPR006941 -
Tsu07g04071 287 SUPERFAMILY Ribonuclease H-like 17 285 IPR012337 -
Tsu07g04071 287 Gene3D - 11 286 IPR036397 GO:0003676
Tsu07g04071 287 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 15 286 IPR039637 GO:0004535|GO:0030014
Tsu07g04071 287 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 15 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04071 Tsu-Chr7 46644112 46645863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04071 K12581 - gmx:100790027 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04071 07 46644112 46645863 Tsu07g04071 07 46644112 46645863 ECH