Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04058 atgacaattctCATCCACTTAATAATTATACTACTTTCATTATTTTCTCTCTTGTGCTTTACCTTTACTTCTGCTCATATCATCATACCCAAATTTCCTTCTTCAGTGGTTAGTCCAGAGTTACAGCAAAGTTCTGTTTCTGTCCCAAATGGACTTTATAGGACAAAATTCTTTACCCAAATACTTGATCACTTCAATTATAATCCTCAAAGCTATCAAACTTTTCAACAAAGATATCTCATCAATGATACCTATTGGGGTGGTGCCAAAAAGAAAGCTCCAATCTTTGTCTACACTGGAAATGAAGGGGACATAGAATGGTTCACACAAAACACTGGCTTTATGTTTGAAATAGCACCTTATTTCAATGCCCTTTTGGTTTTTATTGAGCATAGATACTATGGAAAATCAATACCATTTGGAGGAAATGATGAGGTTGCAAATAGAAATAGCAGCACCCTTGGATATATGAGCTCCACACAAGCTTTGGCTGATTATGCCACACTCATAATTGATCTTAAGAAGAATTTGTCAGCAATTGATTCACCTGTTGTTGTGTTTGGAGGATCCTATGGAGGAATGCTAGCTGCATGGTTTAGGTTGAAGTATCCACACGTTGCAATTGGAGCTTTAGCATCCTCTGCTCCAATCCTTcaatttttggatttggtttcACCATATACATTCACTAACATTGTCACTCAAGACTACAAGAGTGAGAGTGAGAATTGTTACAAAGTGATCAAAGGATCTTGGAAACAAATAGAAGACACAGCCAATGCAACAGGAGGAATAGAACAGCTACAACAATCATTCAAAATATGCAAGAATAATACAATTACTGCAGATGCTCTCAAAGATTGGATTCAAACAGCTTTGATGTACACAGCCATGACAGATTATCCAACACCAACAAATTTTCTAACTCCCTTGCCAGCTTATCCAGTTAGAAAGATGTGCGAGGCGATTGATAGTATATCCACGGCTGGAAACGAATCGCTCACCAAGATGTATGCTGCAgcaaatattttctataattataCTGGAACTGTCACATGTTTTGATATTGGTAATGATTCAGAGGATTCTCTTGATCAGGGTGGATGGGATTGGCAGTCATGTACGGAAATGATAATGCCCCTAGGTGGGAACAATGAGGAGAGCATATTTCCAGCTCACAAATGGAAGTTGGAAGACACACTCTCTTACTGCAAACATGAATATCAGTATCACATAGTGCCAAGACCCCATTGGATTACTACCGAGTTTGGTGGTCAAGATATTGGCAGAGTTCTGAAAAGGTTTGGGAGTAACATTATCTTTTTCAATGGTTTAAGAGACCCTTGGAGTGGTGGAGGGGTATTAAAGAATATATCAGAAACTTTAATTGCTATAGTTGCAAAAGAAGGAGCTCATCATGTAGACTTGAGGTTCTCAACAAAGGGAGATCCAAAGTGGCTAAAAAATGTAAGGAAACAAGAAGTAAGGATCATAGAAAGTTGGATATCCCAATATTATCAAGACTTATTACTACAAGGATGA 1542 0.3696 MTILIHLIIILLSLFSLLCFTFTSAHIIIPKFPSSVVSPELQQSSVSVPNGLYRTKFFTQILDHFNYNPQSYQTFQQRYLINDTYWGGAKKKAPIFVYTGNEGDIEWFTQNTGFMFEIAPYFNALLVFIEHRYYGKSIPFGGNDEVANRNSSTLGYMSSTQALADYATLIIDLKKNLSAIDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILQFLDLVSPYTFTNIVTQDYKSESENCYKVIKGSWKQIEDTANATGGIEQLQQSFKICKNNTITADALKDWIQTALMYTAMTDYPTPTNFLTPLPAYPVRKMCEAIDSISTAGNESLTKMYAAANIFYNYTGTVTCFDIGNDSEDSLDQGGWDWQSCTEMIMPLGGNNEESIFPAHKWKLEDTLSYCKHEYQYHIVPRPHWITTEFGGQDIGRVLKRFGSNIIFFNGLRDPWSGGGVLKNISETLIAIVAKEGAHHVDLRFSTKGDPKWLKNVRKQEVRIIESWISQYYQDLLLQG 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04058 513 Gene3D Serine carboxypeptidase S28, SKS domain 225 394 IPR042269 -
Tsu07g04058 513 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 3 511 - -
Tsu07g04058 513 SUPERFAMILY alpha/beta-Hydrolases 112 476 IPR029058 -
Tsu07g04058 513 Pfam Serine carboxypeptidase S28 60 493 IPR008758 GO:0006508|GO:0008236
Tsu07g04058 513 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 3 511 - -
Tsu07g04058 513 Gene3D alpha/beta hydrolase 57 502 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04058 Tsu-Chr7 46551065 46554955 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04058 K01285 - gmx:100787376 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04058 07 46551065 46554955 Tsu07g04058 07 46551065 46554955 ECH