Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04047 ATGTTATCAGCTCTGATGTATGTGCTGGTACCTATGCCTTGCTTATTCTTTGGAGGCGGGTCCACTCAATTTCTGATGAGCCGTGATGGTGGGGGTTGGATGGATGCTGCAAAGTTTTTGACTGGAGCATCAGCTGTGGGGAGCATAGCCATTCCTATAATCCTTAAGCATGCTCACATGATTGAGACTGGAGCAATGCTCATTGAGCTAGTATCGTTCTTCATATTTATATGTACTGTTATGTGTTTCCACCAAGCGAGCCTTGACGACGATTGGTGA 279 0.4552 MLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04047 92 Pfam Vacuolar protein sorting 55 1 86 IPR007262 -
Tsu07g04047 92 PANTHER LEPTIN RECEPTOR-RELATED 1 91 IPR007262 -
Tsu07g04047 92 PANTHER RH04491P 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04047 Tsu-Chr7 46467770 46468616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04047 1 87 EF-hand Containing Proteins AT1G32410 52.222 2.16e-26 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04047 - - gmx:100800586 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04047 07 46467770 46468616 Tsu07g04047 07 46467770 46468616 ECH