Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04039 atgtcTGGTAAAGAAAAAGGTGTTAACGTTCAAGTTCTTCTTCGATGCAGGCCGTTTAGTGATGACGAGTTACGGAGTAACGCGCCGCAAGTCGTTACTTGTAATGATTACAGTAGAGAAGTTGCGGTGTCTCAGAATATTGCCGGTAAACACATCGATAGGATTTTCACCTTCGATAAGgtttttggtCCATCTGCACAACAAAGGGAACTTTATGAACAGGCTGTTACACCGATTGTAAACGAAGTTCTCGAGGGATTTAATTGTACCATATTTGCTTATGGTCAAACTGGTACGGGAAAAACATATACTATGGAAGGGGAATGTAAAAAATCGAAGAGTGGCCCTAATGGAGAGTTGCCTCCGGACGCAGGAGTAATTCCTAGGGCTGTTAAGCAGATTTTTGACACACTTGAGAGTCAGAATGCCGAGTATAGCGTGAAAGTAACCTTTTTAGAACTGTATAATGAGGAGATTACTGATTTGCTTGCTCCCGAAGAGCTTTCGAAGGTTACTTTGGAGGAGAAGCAAAAAAAGCAGCTGCCTCTCATGGAGGATGGCAAAGGTGGAGTTCTTGTAAGAGGGTTGGAGGAGGAAATTGTGACGTGTGCTAATGAGATTTATACTCTTCTTGAAAGAGGGTCTTCTAAACGGCGCACTGCAGAAACTTTACTAAACAAACAATCTAGTCGTTCACATTCATTGTTTTCGATTACAATCCACATCAAAGAAGCAACCCCTGAAGGTGAAGAACTAATTAAGTGTGGTAAACTGAATTTGGTGGATCTTGCTGGCTCAGAAAATATTTCTCGTTCTGGTGCTAGAGAGGGTCGTGCACGAGAGGCTggagaaattaataaaagtttGCTTACATTAGGGCGAGTGATTAATGCACTTGTGGAGCACCTTGGTCATATCCCTTACAGgGATAGCAAGCTGACTCGTTTACTCCGCGACTCACTTGGGGGAAGAACCAAGACATGCATTATAGCGACAGTATCCCCTGCTGTTCATTGCTTAGAGGAAACTTTGAGCACATTGGATTATGCACATAGGGCAAAGAACATTAGGAATAAGCCAGAGGTCAACcaaaaaatgatgaaatcaaCACTTATCAAGGATCTTTATGGTGAAATTGATCGCCTTAAGGCCGAGGTTTATGCTACCCGTGAGAAAAACGGGGTCTATATTCCAAAGGAAAGATACTATCAGGAAGAGATTGAAAAGAAGGCTATGGCAGATCAGATTGAGCAGATGGGCATCACAATAGAATCTTATCAGAAGCAACTTGAGGATATGAGAAACAAGTATGATGATCAAGTTCGTCAGTGCTCTGATTTAAGCAACAAACTTGATACCACTGAGAAAAACTTAAACAAAACTAGCAAGTTGCTTGGCAATAGAGAGGAAGAATTAAAAAAGTGTCGCTATACCCTGAATGAAAAGGAATTCATCATATCTGAACAGAGAAAAGCAGAAAATGCTCTAGCTCATCAAGCATGCGTTTTACGAGCTGATTTAGAAAAAGCTCTTCAGGATAATGCCTCGTTATTTCTGAAAATTGGCAGAGAAGATAAACTTAGCTCAGAAAATAGAGCTGTTGTGAACAATTATCAAGCGGAACTTGCCCAGCAGGTTGGTTCTCTTTGCAACATTGTTGCAACATCGTTGTCTGAACAGAATGGACATCTACAAGGTGTGGAGAACCTCTGCAATTCCTTTTTGGGCATTCATGATAAGGCGGTTGTTGatttaaaagagaaaatgaaagaaattaggGGGGTGTATGTGTCACATATTGAGGCGGTGCAAAATGTTGTGCGTTTGCATATGGCAAACTCGGATGCATCCTTGGAGGAGTTATCATCTGCCATATCCTCTCATGGTCATTCAATTGAAGAGTTCCTTACAACTGAGGCCACGGAAGCCGGCTCAATTTTTGATGAGCTTCAGAGCTGCCTTTCAACACAACATGGTGAATTGACACTTTTTGCCAAGGAAGTGCGCAATAGGTTCAATCTTAGTGTGGAACAAATAAAGGAGATATCTGAGAAATCTGAAGAATTAGTTGAAAAGCTTTTTGAAGAATCAAAAAAGCTTGAAGATTTTGTAGCACAGGCTGACCAAATGCAAACAGAGAGCATTGATGAGTTTAAGAAAGCTTATGAGGAGCAATCAAAATCTGAGTCAGAGAAACTCATTGCTGATATGACTACTTTGGTTTCTGGTGTCCTTCGTCGTCAAAATGATCTTGTAAACTCAAGGCTTGTTGGTTTTAGAGAAAGTGGTAAAAAGAACAAGTCATTCTTGGTTGGACACGCGTCATCAGTGGGAGAACTTGCGACCAGTGCAAAAAGAAAATGGCAGTCGTATTCCATACAAGCagaaaaagaagcaaaagaTACTGCTGACTATTCTGCAGCAAAGCATTGTCGTATGGAGGTACTCCTTCAGCAATGTGTTAACACCGCTCATTCGGCTTTCGGACAAGTGAAAAGGACACACGAGGCTGTAAATGAGTTAGGGACCAAACATATTTGTTCGACAGAATCACTTATCAGGAGTGCTTGTGATAGCAATGTGCAACATGTTGCTGAGGTCAATTCTGCACGAGCAGCAGCCGAGGAAGATGTGGCAAAGAACAGTGACGATTTTCTCAAGCAGTTTGATGCCGCATCTGCAGAAGAACGTGAGTCTGTATGTAGCGTTGTAAATGTTGTGAAAAGCCATGCAAATACACTTGAGAAGTTCAGAGAGGATCATGCTGGACAAGCTACTTCCATTGAACATAGGGCATGCGAGACTTTCCAGCAGGAGTATATGGACTATGAGCCTAGTGGCACAACACCAATAAGATGCGAGCCTGAGGTTCCAAGTAAGGGTACAATTGACTCTCTTCGAACCTTGCCAATCGAATCCCTTCTTGAGGAATTCCGGGAAAATAATTCATATGAATCTTCTTCTGATGTAAAGGAGTTGAAACCATCACTTATTCCACGCTCTCCTCTCACCCAATTGAATTAA 3024 0.4077 MSGKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYSREVAVSQNIAGKHIDRIFTFDKVFGPSAQQRELYEQAVTPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKKSKSGPNGELPPDAGVIPRAVKQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPEELSKVTLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTCANEIYTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIRNKPEVNQKMMKSTLIKDLYGEIDRLKAEVYATREKNGVYIPKERYYQEEIEKKAMADQIEQMGITIESYQKQLEDMRNKYDDQVRQCSDLSNKLDTTEKNLNKTSKLLGNREEELKKCRYTLNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFLKIGREDKLSSENRAVVNNYQAELAQQVGSLCNIVATSLSEQNGHLQGVENLCNSFLGIHDKAVVDLKEKMKEIRGVYVSHIEAVQNVVRLHMANSDASLEELSSAISSHGHSIEEFLTTEATEAGSIFDELQSCLSTQHGELTLFAKEVRNRFNLSVEQIKEISEKSEELVEKLFEESKKLEDFVAQADQMQTESIDEFKKAYEEQSKSESEKLIADMTTLVSGVLRRQNDLVNSRLVGFRESGKKNKSFLVGHASSVGELATSAKRKWQSYSIQAEKEAKDTADYSAAKHCRMEVLLQQCVNTAHSAFGQVKRTHEAVNELGTKHICSTESLIRSACDSNVQHVAEVNSARAAAEEDVAKNSDDFLKQFDAASAEERESVCSVVNVVKSHANTLEKFREDHAGQATSIEHRACETFQQEYMDYEPSGTTPIRCEPEVPSKGTIDSLRTLPIESLLEEFRENNSYESSSDVKELKPSLIPRSPLTQLN 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04039 1007 MobiDBLite consensus disorder prediction 981 1007 - -
Tsu07g04039 1007 CDD KISc_BimC_Eg5 7 365 - -
Tsu07g04039 1007 PRINTS Kinesin heavy chain signature 86 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04039 1007 PRINTS Kinesin heavy chain signature 306 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04039 1007 PRINTS Kinesin heavy chain signature 257 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04039 1007 PRINTS Kinesin heavy chain signature 223 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04039 1007 Coils Coil 416 464 - -
Tsu07g04039 1007 PANTHER KINESIN-LIKE PROTEIN KIF11 3 1007 - -
Tsu07g04039 1007 PANTHER 125 KDA KINESIN-RELATED PROTEIN-LIKE 3 1007 - -
Tsu07g04039 1007 Coils Coil 676 696 - -
Tsu07g04039 1007 ProSitePatterns Kinesin motor domain signature. 256 267 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu07g04039 1007 Gene3D Kinesin motor domain 2 387 IPR036961 -
Tsu07g04039 1007 Pfam Kinesin motor domain 15 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04039 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Tsu07g04039 1007 SMART kinesin_4 7 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04039 1007 ProSiteProfiles Kinesin motor domain profile. 9 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04039 Tsu-Chr7 46409667 46416268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04039 9 386 Miscellaneous Gene Families AT5G06670 37.240 2.03e-62 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04039 K10398 - gmx:100800246 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04039 07 46409667 46416268 Tsu07g04039 07 46409667 46416268 ECH