Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04037 ATGAGCAGGTCAGGGCAACCCCCGGATTTGAAGAAGTACATGGACAAACAGCTTCAAATTAAGCTGAATGCCAATCGTATGATTATCGGTACTCTCCGTGGCTTCGACCAGTTTATGAATTTGGTTGTTGACAATACTGTGGAGGTGAATGGCAACGAGAAAAATGACATAGGGATGGTGGTAATCAGAGGAAACAGTGTGGTCACAGTAGAGGCACTTGAACCAGTGAACAGAAccacctaa 243 0.4321 MSRSGQPPDLKKYMDKQLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRTT 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04037 80 PIRSF Lsm7 5 79 - -
Tsu07g04037 80 Gene3D - 1 76 - -
Tsu07g04037 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Tsu07g04037 80 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Tsu07g04037 80 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Tsu07g04037 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Tsu07g04037 80 Pfam LSM domain 9 71 IPR001163 -
Tsu07g04037 80 SMART Sm3 8 72 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04037 Tsu-Chr7 46376057 46377777 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04037 K11099 - gmx:100305530 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04037 07 46376057 46377777 Tsu07g04037 07 46376057 46377777 ECH