Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04026 aTGGGTTGCGTTTCCTCAAAACACATCAAAAAAGACATCAACCAAGAAAAAAATGGTTACATTAACATTAACCATGTTGTTTCTCTCACTTCCTCAACTTTAGGAGCACTCAAAttagaaaacaacaacaacaatgatgatgatgattcattCAATTCCattgttgttgtttcagaaacagagtcaaaaacagagcaaaaaacAGAGTCTGAAACAGAGTCCAAATCACCAAAACACAAAGACCCAGAAGCTGTAATCAACATCAATGCTTGGGAACTCATGGAGGGTCTTGAAGAAGGAGTACCCATTTCAAATTTCCCCAAGAAAAGTCCAAAGTCTGCACCTTTTCTTCGTGGGTTTTTGGCTTCTGATACAAGAAGTCCTTTGAAGTTTCTTAATCAATTTGGGTCACCAAAAACCTCACTCAAGAAGCCTTCTGGGAAAGAGAATAAGGTTCAAGTTAATAATTTGGTAAGAGGTGGTGTTAGACGTTTGGATTATAGTCCTAAGGGAATTATGAAACCCTCCACTGCAAATTCTTCTCCTAAGAATTCGAGTTTTTCGCTAAAGGGATCTCCGTTTTCTGCAAGAAGAAATAGTTTTGGGAATGATAGTGTGAGAAAAAGTCCTAGTCCTTTTTTTGATCCAGAGATTATTGCATCCTATGAAAAGGAACTTTCTGAAGAGGAAGAACAAATCAAGAGAATTGTTTTCGCTACTCCAAAAACACGAAGGGCGAAGAAATCTCTTGATTCAGTTACACTTTTGAACTTGTTTGAGAAAAATTGTCCTCCTGGAGGAGAAAATTCTGTTGTAATTTACACTACTACATTGAGAGGAATTAGAAAGACATTTGAAGATTGTAACAAAGTTCGATTGATTATTGAATCGTATTGTGTTTGTGTGCGCGAGCGCGATGTGTCTATGGATTCCGGGTTTAAGGAGGAATTGAAGAAGCTTATGGGGATGAAACAAGTTCAAGTTCCTGTTGTGTTTGTGAAAGGAAGGTTTATTGGAGGTGTTGATGAAGTTGTGAAATTGGAAGATGAGGAAAAATTGGGTGTTCTTTTGGAAGGGATTCCAAAGGCATTAGGAGTTTGTGAAGGGTGTGGAAGTTTGAGGTTTGTGATGTGTAAGGAATGTAATGGAAGTTGTAAGGTTTTGGATGAGAAGCAACAGAAAACGGTTAAGTGTGGTTATTGTAATGAGAATGGAATAATTCGTTGTTCTCTATGTTgttga 1242 0.3527 MGCVSSKHIKKDINQEKNGYININHVVSLTSSTLGALKLENNNNNDDDDSFNSIVVVSETESKTEQKTESETESKSPKHKDPEAVININAWELMEGLEEGVPISNFPKKSPKSAPFLRGFLASDTRSPLKFLNQFGSPKTSLKKPSGKENKVQVNNLVRGGVRRLDYSPKGIMKPSTANSSPKNSSFSLKGSPFSARRNSFGNDSVRKSPSPFFDPEIIASYEKELSEEEEQIKRIVFATPKTRRAKKSLDSVTLLNLFEKNCPPGGENSVVIYTTTLRGIRKTFEDCNKVRLIIESYCVCVRERDVSMDSGFKEELKKLMGMKQVQVPVVFVKGRFIGGVDEVVKLEDEEKLGVLLEGIPKALGVCEGCGSLRFVMCKECNGSCKVLDEKQQKTVKCGYCNENGIIRCSLCC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04026 413 MobiDBLite consensus disorder prediction 59 83 - -
Tsu07g04026 413 Gene3D Glutaredoxin 264 359 - -
Tsu07g04026 413 CDD GRX_GRX_like 270 409 - -
Tsu07g04026 413 MobiDBLite consensus disorder prediction 168 189 - -
Tsu07g04026 413 ProSiteProfiles Glutaredoxin domain profile. 259 364 - -
Tsu07g04026 413 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 413 - -
Tsu07g04026 413 Pfam Glutaredoxin 271 338 IPR002109 -
Tsu07g04026 413 Coils Coil 219 239 - -
Tsu07g04026 413 MobiDBLite consensus disorder prediction 173 189 - -
Tsu07g04026 413 MobiDBLite consensus disorder prediction 62 82 - -
Tsu07g04026 413 PANTHER EMB|CAB85507.1 1 413 - -
Tsu07g04026 413 SUPERFAMILY Thioredoxin-like 263 358 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04026 Tsu-Chr7 46314540 46316062 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04026 K17479 - gmx:100781497 482.641