Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04024 ATGCTAATACCTCTTTGCAatccttctctttctcttcaatcGATCTCATTTCATGGAAAACCTAACAACAAAATTCTCTCTATCACCAACTCTGCATCTTCCGGCAACAGATTAAACACCCAGCGAAAAACCATATCAGCTTTCGAAGCTCGAATTTCACTCATTTCCGCTCTCGCTTCACAAACCACTTCTCTCTCTCAGCGACTTGTTGCCGATGTGGCCACAGAGActgcaaaatatttgtttccgAAAAGATTTGAAAGTCGAACTCTTGAAGAGGCGTTGATGACAGTTCCGGACCTTGAGACCGTCAAGTTCAAAGTTGTAACCAGAAAGGATCAGTATGAGATTAGGGAAATTGAGCCTTACTTTGTAGCAGAGACTACAATGCCAGGGAAGAGTGGGTTTGATTTCAGCGGTGCTTCTCAGTCATTTAATGCCCTTGCTGAGTACCTTTTTGGTAAGAATACAACGAAGGAGAAAATGGAGATGACTACACCCGTTATTACCAGTAAGAACCAATCCGACGGGGTTAAAATGGATATGACAACTCCTGTGATAACAACAAAGACGGGAGATCAAGATAAATGGAAAATGTCTTTTGTCTTGCCTTCAAAGTACGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGACAATTAGAGAGGTGTCTAGAAAAATAGTTGCTGTAGTTTCCTTTTCAGGTTTTGTGATTGATGAAGACGTTAAGCGGCGTGAACTGAAACTAAGAGAAGCTCTGAAAAATGATGGACAGTTCAAAATTAAAGAGGGAACTGCAGTAGAGATTGCACAGtATAATCCCCCATTTTCTCTTCCATTCCAACGCCGTAATGAGATCGCATTGGAGGTGGAATGGAAAAATAAGTAG 891 0.3984 MLIPLCNPSLSLQSISFHGKPNNKILSITNSASSGNRLNTQRKTISAFEARISLISALASQTTSLSQRLVADVATETAKYLFPKRFESRTLEEALMTVPDLETVKFKVVTRKDQYEIREIEPYFVAETTMPGKSGFDFSGASQSFNALAEYLFGKNTTKEKMEMTTPVITSKNQSDGVKMDMTTPVITTKTGDQDKWKMSFVLPSKYGANLPLPKDSSVTIREVSRKIVAVVSFSGFVIDEDVKRRELKLREALKNDGQFKIKEGTAVEIAQYNPPFSLPFQRRNEIALEVEWKNK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04024 296 Gene3D Regulatory factor, effector binding domain 175 296 IPR011256 -
Tsu07g04024 296 Gene3D Regulatory factor, effector binding domain 100 174 IPR011256 -
Tsu07g04024 296 PANTHER HEME-BINDING PROTEIN-RELATED 33 295 IPR006917 -
Tsu07g04024 296 SUPERFAMILY Probable bacterial effector-binding domain 96 172 IPR011256 -
Tsu07g04024 296 Pfam SOUL heme-binding protein 169 289 IPR006917 -
Tsu07g04024 296 PANTHER OS02G0533200 PROTEIN 33 295 - -
Tsu07g04024 296 SUPERFAMILY Probable bacterial effector-binding domain 173 291 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04024 Tsu-Chr7 46291902 46295470 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04024 - - ccaj:109796809 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04024 07 46291902 46295470 Tsu07g04024 07 46291902 46295470 ECH