Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04016 ATGAGTTTGGATACTGTAACAATGGCAACATGTTTCGCACCTGCGAATTCTCGAAATTCAGCAGGGGTGTTAGCTGTTAATGGAGGAAGAACACTGTTAGAGAATCGACAAATTAATAAACCGTTTTTTGTGAAAATTCATGAAAATAAGTTTGGATTTTCGGGTGGTAATAGAAAATGCGGTTTGTTTCAAGTGAAGTCTGCTGGATTACCGAATTCGCATAGTGTGAGTCCTTATCATCATAGCAAAGATCCTTTTTTGGATCTTCATCCTGAGATTTCGATGCTTAGGGGAGAAGGAAGTGGTGCATTGAATAACCCGAATAGACTGAGAAAAGATACGTCCGGTGGAGATGTGGATGAAGGATTGGAAGACACTTCTATTCCAAGTAATTATAATGAAGCGAAGATAAAAGTTATtggtgttggtggtggtgggtCGAATGCGGTAAATCGTATGATTGAGAGTTCTATGAATGGTGTGGAGTTTTGGATTGTTAATACCGATGTTCAGGCGATGAGGATGTCACCTGTCAATTCTGAGAACCGATTGCCAATTGGTCAAGAGCTTACACGGGGTCTTGGTGCTGGTGGTAACCCAGAGATTGGTATGAATGCTGCAAAAGAAAGCAAAGAATCGATACAAGAGGCGGTTTATGGAGCTGACATGGTTTTTGTTACTGCTGGAATGGGCGGAGGAACTGGCACTGGTGCAGCTCCAGTTATTGCCGGTATCACAAAGTCAATGGGTATACTAACTGTTGGTATTGTCACAACCCCTTTCTCGTTTGAAGGACGGAGGAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTAAGAGATAATGTCGATACCCTGATAGTTATTCCAAATGACAAGTTGCTGACTGCAGTTTCTCAGTCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATCCTTCGACAAGGTGTTCGTGGTATTTCTGATATTATTACGATACCCGGGTTGGTGAATGTTGACTTTGCCGATGTTAGAGCTATAATGGCCAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACGAGGGCAAGAGATGCTGCATTAAATGCTATCCAGTCACCCTTACTAGATATTGGTATAGAAAGGGCCACTGGAATTGTATGGAACATAACTGGTGGAAGTGATCTGACCTTGTTTGAGGTAAATGCCGCAGCAGAAGTTATATATGACCTTGTGGACCCCACTgctaatttaatatttggaGCAGTAATAGATCCATCACTCAGTGGTCAAGTGAGCATAACATTGATTGCCACGGGATTCAAGCGTCAAGAGGAAAGTGAAGCGAGACCCGTACAGACCAGTCAACTCACACAAGGAGATACCATTGCCAGTCGACGATCTTCCGCTTTCACTGATAGCGGTTTGGTTGAGATACCAGAATTCTTAAAGAAGAAAGGGCGCTTACGCTATCCAAGAGCTTAA 1482 0.4204 MSLDTVTMATCFAPANSRNSAGVLAVNGGRTLLENRQINKPFFVKIHENKFGFSGGNRKCGLFQVKSAGLPNSHSVSPYHHSKDPFLDLHPEISMLRGEGSGALNNPNRLRKDTSGGDVDEGLEDTSIPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVNSENRLPIGQELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGAAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEARPVQTSQLTQGDTIASRRSSAFTDSGLVEIPEFLKKKGRLRYPRA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04016 493 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 8 490 IPR045061 GO:0003924|GO:0005525
Tsu07g04016 493 Gene3D - 346 456 IPR037103 -
Tsu07g04016 493 Hamap Cell division protein FtsZ [ftsZ]. 132 474 IPR000158 GO:0003924|GO:0005525
Tsu07g04016 493 Pfam FtsZ family, C-terminal domain 347 441 IPR024757 -
Tsu07g04016 493 TIGRFAM ftsZ: cell division protein FtsZ 130 455 IPR000158 GO:0003924|GO:0005525
Tsu07g04016 493 ProSitePatterns FtsZ protein signature 2. 222 243 IPR020805 GO:0005525
Tsu07g04016 493 MobiDBLite consensus disorder prediction 99 128 - -
Tsu07g04016 493 Pfam Tubulin/FtsZ family, GTPase domain 136 297 IPR003008 GO:0005525
Tsu07g04016 493 SUPERFAMILY Tubulin nucleotide-binding domain-like 135 333 IPR036525 -
Tsu07g04016 493 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 8 490 - -
Tsu07g04016 493 Gene3D Tubulin/FtsZ, GTPase domain 126 345 IPR036525 -
Tsu07g04016 493 PRINTS Cell division protein FtsZ signature 337 358 IPR003008 GO:0005525
Tsu07g04016 493 PRINTS Cell division protein FtsZ signature 251 272 IPR003008 GO:0005525
Tsu07g04016 493 PRINTS Cell division protein FtsZ signature 223 243 IPR003008 GO:0005525
Tsu07g04016 493 PRINTS Cell division protein FtsZ signature 314 336 IPR003008 GO:0005525
Tsu07g04016 493 SMART Tubulin_C_4 332 449 IPR018316 -
Tsu07g04016 493 SUPERFAMILY Tubulin C-terminal domain-like 329 443 IPR008280 -
Tsu07g04016 493 CDD FtsZ_type1 147 439 IPR000158 GO:0003924|GO:0005525
Tsu07g04016 493 SMART Tubulin_4 136 330 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04016 Tsu-Chr7 46236601 46242068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04016 K03531 - gmx:100778286 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04016 07 46236601 46242068 Tsu07g04016 07 46236601 46242068 ECH