Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04015 ATGGAGAATTTTCCTGTTGAAGTAATTGGTATGATATTATCCCATCTTGGGTCTGCTAGGGATATTGTGATTGCATCCTTAACTTGCAAGAAATGGAAAGATGCTTGGCACAATTACCTCCATGCTCTTTCTTTCGATACTCGTGATTGGCACCTATATCGCGAAGTTTGTTCTGGTCATTTGGAAATGATTATCACTTGTACACTTTTTCAAACTAGAGGATTGCAGTGCTTAACAATTTTCATGGATGATGATCATACGTTTCATGTTACTCCTGTCATTGCTTGGGTTATGTCTACAAGGGATACTTTGCGCCAGCTGCGTTATAATGTGAGAACATTGCCTAATTTCAATATCATTGATAAATGCGGTAGGCAAAGATTGGAAGTTTTGTCCTTGGCTCACAACCCTATCTTGCATGTTGACCCGAGGTATCACAAATTTCCTTGCTTGAAGTCGTTGTCGTTGAGTTTCGTTAGCATCTCGGCATTGGATTTAAGTCTTCTGCTTTCTGCATGTCCGAAACTTGAAACTTTTTCTATAGTTAGTCCAGATATCGCTATGTTGGATTTGAAGGCTTCCATAGAGCTCAGCAGCTCTTCTTTGAAGGATTTCTTTATTGAGTCATTTGATGTCGATAGATTCATATTGAAAGCAGATTCACTCGAGAATCTACATCTGAAAGATTGTACCTTTGAGGTTTTCGAATTGATCGGTAAGGGGACGTTGAAAGTATTGAAGATCGATGATGTGGATGTTATCCATCTCGACATTGGCGATAGTACAGAGAACCTTGAGATTGTTGATGCTTCAGACTTCACAATTTTGTGGCCGGAATTTTATAACACGATCTCGAAAGCGTCAAATTTAAAAAAGCTTAGACTGTGGAGTGTTATTTTTGATAATGAGGATGAGGTTGTTGATATAGAGACCATTTCTGCTTGTTTTCCAAGACTAACACACCTTTCCTTAAGTTATGATTTACAAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTCTCTTATGAATGTGGTTGTGTTAGAACTTGGATGGACTACAATCAGTGATCTTTTCTCAGTTTGGGTAGCTGGACTTTTGGAAGGATGTCCTAATCTAAAAAAGTTGGTTATTTATGGTTATATTGCTGATGTCAAAACAGATGAAGAGCTTCAAACTCTTGCTAGATTTTCTGAATTCATGCTTCAACTAGGAAGAAAATATAGTCATGTaaagtttgattttgattattag 1257 0.3739 MENFPVEVIGMILSHLGSARDIVIASLTCKKWKDAWHNYLHALSFDTRDWHLYREVCSGHLEMIITCTLFQTRGLQCLTIFMDDDHTFHVTPVIAWVMSTRDTLRQLRYNVRTLPNFNIIDKCGRQRLEVLSLAHNPILHVDPRYHKFPCLKSLSLSFVSISALDLSLLLSACPKLETFSIVSPDIAMLDLKASIELSSSSLKDFFIESFDVDRFILKADSLENLHLKDCTFEVFELIGKGTLKVLKIDDVDVIHLDIGDSTENLEIVDASDFTILWPEFYNTISKASNLKKLRLWSVIFDNEDEVVDIETISACFPRLTHLSLSYDLQDGVLHYGLQGLSSLMNVVVLELGWTTISDLFSVWVAGLLEGCPNLKKLVIYGYIADVKTDEELQTLARFSEFMLQLGRKYSHVKFDFDY 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04015 418 SUPERFAMILY F-box domain 2 61 IPR036047 GO:0005515
Tsu07g04015 418 Gene3D Ribonuclease Inhibitor 79 401 IPR032675 -
Tsu07g04015 418 PANTHER F-BOX/LRR-REPEAT PROTEIN 1 417 - -
Tsu07g04015 418 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
Tsu07g04015 418 SMART fbox_2 4 44 IPR001810 GO:0005515
Tsu07g04015 418 SUPERFAMILY RNI-like 124 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04015 Tsu-Chr7 46230680 46232824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04015 - - gmx:100792331 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04015 07 46230680 46232824 Tsu07g04015 07 46230680 46232824 ECH