Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04000 ATGGAAGTCTCAGTCTCAGACGACGATGATGAAGTTATCCTCGTTTGCACCAACCTTGATCGTCATCCAATTCAAACAACTCAAGAAATTCTCCTTTCAACCACTGATATCATCGTTTCCGATTTATCAACATTTCTCAATTTTCACACTATCAAAATTCAGACACATCGCAATAGACTCATTGAACAATCTATGTATTTCCGAGGCCTCCTTGGCGGAAGCTTCAGTGAATCAGGCTTGGGCTCTATTACTATCAACTGGAATTTGCCCGTGTTTGTGCAAATTCTTAAGCATATGTGTGGCTGTCCATTGGATATTACTACTGAAAATGTCCTTTCTCTTTATGAGGGTGCACTTTATTTTGGAGTGGAGACACTTCTCTTAAAGTGTGAGACTTGGTTTTCCGCGGTATTCTCTCCTAATGGATTTCAATTAACGCAAATACAGATGGAGGATTTGATCGAAATCTGGAAATTTGGCTTGGATCATGCAAGTGATTTCATTCTAAACTTATGTATTGGCTACCTAGCAAGAAATTTTATGTGGGCCAAGCAGAACATATGTTTTGGAAAAATTCCGTATAACTTGCTGTTATCTTCAGTAGAGCACCCTCATTTGACTATTGACAGTGAGATGCATCTTTCTGATGCACTTCTTCTTTGGCTTGAAAGTAACATGGAAAATTTGGAGAGGCAGAGCAAAACAGAAGACAATTACATTGGAATTTTAAAACAAGTTCATGTGGACCTTTTGCCTTTGTGGTTTGTTGCAGGAAAAAGAAACTCTTCTAATTTTAGGCAGCTGGCTGAGGAAAGCCTGGGTTCAATTTTGAGAGCACTGAATATTCTACCGATAGGTTCCCTTGATATTTCTGGGTACAATGACTTGCAACATCTCAGGATTCGACTTACAGAATATTCGAAGAAAATTGACCTTTCCAATTGTCCGCAAATAACATCTGCAATACTGCTTCTGTCACTCATACCTGCATCATATCGAACGGATCCCATGCAAAGGAAGATTATAGAACAATTCTTTATTAATTCTGGACATCCTATAAAAGAGAAATATGAATTCCCACAAAAACTGTTAGAACCCGTTATCTTTGAAGCAGTTCAGGAAGTGGATATCTCGAAGTGTCGAACACTGCTTATTGAACATGCTGTCGATTGCTTCAGCCAGTCCTTTTCTTCtttaagaatattaaaagtAGCTTATCTTTTGCATATCAGAACAACCAGTTTCCTCCAGTTATTGGAGAAGTGCTCTTTGGTCAGCGAAATTGACTTGACTGTTGATGTTACTCCTCTAATACCAGCATCAGTTACAGTTGTACCTTTTAGTACTGCTGTGACACCACTGGTACCAGAGAAGACCtcaagtcttaaatataaagcAGTGGAAACCATGTCATTTCATGAATCTAgacatcaaatattttgtgttaCAAAGCTCACATTGGAAGGAAGAACTGATGTCAGTGATTTGAGTCTCCAGTATATCTCCAAATTATGTGTTTCATTGTGTCACCTGAATATTAAAGGATGTATTTATGTCACTGATATTGGCATATCAGATCTCATAGACCAATGTAAAAAGCTTAATTCATTAGTGGTCTGTGATACTTCATTTGGGATAAATTCAGTTCAAGCTCTTTGTTCAGCTATTTCTGAAGGTGGCAACTTTCCCTCTTTATGTTCTAGAGATAAGCATTTGAATTCTTTGGCGGGTAATCTTCAAGCTCTGCATATAGGTGGCTGCATAGGTGTTTCTGAGTTGTCTCTACAAGATCTTATGTCTCAAACACAAGTTTTGAAGAGTCTATGCCTGAGAGGGACTCACTTGGTTGACCAGGCACTATATAATTTCAAAGGTTCTTCATTGGAGATGCTTGATGTGTCAGACACCAAGATTTCTGAAGCTGCATTAAGTTATGTTATTCATAGACATCCAAATTTGAAGAGTCTGAAAGCAAGAGGTTGCACAAATTTGTTAAAAGGAGATAGTTCTATTGAAAAGAGAGAATGTAGCTTTTCCTCCTTGCATGACGAACTACATGCTGACTTAGGAAAGAAGTGTAGATTGGAAGAAATTGAATTTGGTTGGGGtttttcttccttctctctaagaGCTTTGGAACCTGCGCTGATGTCATTAAAGACCATCAGTGTAGGTTTAGGTGGAATGTTAGGTGAAGATGCACTGAGAGAATTACCAGCAATCTGTCCCCTTCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATCATTGTGACGAGAATAGCTACGTCCTTGATGAACTTACAAGTATTAGCTCTGTGCTATTGCTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCCATGCAAAACCTAAGAAAGTTGAGGCTTGAAAGAGTAACCCCATGGATGACCAATGATGATTTGGTTATTTTAACTCAAAACTGTAGAAATGTGGTTGAGCTTTCATTGCTGGGATGTCCTCTTCTTAACTCAGATTCTCAACAGATAATTTCACGTGCATGGCCAGGCTTGGTCTCTTTGCATCTAGAGGAATGTGGAGAAATAACAGCAAATGGGGTCTCTGTCCTTCTTGACTGCAGAGCTCTTGAAGATCTTCTGTTGCGTCATAATGGGCCTGGGATACAAAGAAACTTCATTTCTCACGCAGCTTCAGAGATGCCATTGCTTCGAAAATTGTCACTGGATATATGTGATGCGAGTGAAGGTTTTGACATTCCAAATTATGCTGCAGACAGACACTTTTTGAGTACCTTGAAGATAGCAAGATGCAAATCTCAAAGATGTTTATTTAATCTCCCAGTTCCTTGTCGTAGACGGTCCGTGCATGTAGAAACACTGGTGCTTGTGTGGAACAGCAAAAATCTCACCAGAACAGTGGTGAAGGAAAGGCTTTAG 2925 0.3822 MEVSVSDDDDEVILVCTNLDRHPIQTTQEILLSTTDIIVSDLSTFLNFHTIKIQTHRNRLIEQSMYFRGLLGGSFSESGLGSITINWNLPVFVQILKHMCGCPLDITTENVLSLYEGALYFGVETLLLKCETWFSAVFSPNGFQLTQIQMEDLIEIWKFGLDHASDFILNLCIGYLARNFMWAKQNICFGKIPYNLLLSSVEHPHLTIDSEMHLSDALLLWLESNMENLERQSKTEDNYIGILKQVHVDLLPLWFVAGKRNSSNFRQLAEESLGSILRALNILPIGSLDISGYNDLQHLRIRLTEYSKKIDLSNCPQITSAILLLSLIPASYRTDPMQRKIIEQFFINSGHPIKEKYEFPQKLLEPVIFEAVQEVDISKCRTLLIEHAVDCFSQSFSSLRILKVAYLLHIRTTSFLQLLEKCSLVSEIDLTVDVTPLIPASVTVVPFSTAVTPLVPEKTSSLKYKAVETMSFHESRHQIFCVTKLTLEGRTDVSDLSLQYISKLCVSLCHLNIKGCIYVTDIGISDLIDQCKKLNSLVVCDTSFGINSVQALCSAISEGGNFPSLCSRDKHLNSLAGNLQALHIGGCIGVSELSLQDLMSQTQVLKSLCLRGTHLVDQALYNFKGSSLEMLDVSDTKISEAALSYVIHRHPNLKSLKARGCTNLLKGDSSIEKRECSFSSLHDELHADLGKKCRLEEIEFGWGFSSFSLRALEPALMSLKTISVGLGGMLGEDALRELPAICPLLETIILHFQVISDIIVTRIATSLMNLQVLALCYCFGDISMSSFKFPMQNLRKLRLERVTPWMTNDDLVILTQNCRNVVELSLLGCPLLNSDSQQIISRAWPGLVSLHLEECGEITANGVSVLLDCRALEDLLLRHNGPGIQRNFISHAASEMPLLRKLSLDICDASEGFDIPNYAADRHFLSTLKIARCKSQRCLFNLPVPCRRRSVHVETLVLVWNSKNLTRTVVKERL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04000 974 Gene3D - 148 272 - -
Tsu07g04000 974 Gene3D Potassium Channel Kv1.1; Chain A 18 138 IPR011333 -
Tsu07g04000 974 SMART LRR_CC_2 505 530 IPR006553 -
Tsu07g04000 974 SMART LRR_CC_2 531 555 IPR006553 -
Tsu07g04000 974 SMART LRR_CC_2 576 601 IPR006553 -
Tsu07g04000 974 SMART LRR_CC_2 791 817 IPR006553 -
Tsu07g04000 974 SMART LRR_CC_2 844 869 IPR006553 -
Tsu07g04000 974 CDD BTB_POZ_ZBTB_KLHL-like 52 121 - -
Tsu07g04000 974 Pfam BTB And C-terminal Kelch 154 256 IPR011705 -
Tsu07g04000 974 PANTHER UNCHARACTERIZED 57 873 - -
Tsu07g04000 974 ProSiteProfiles BTB domain profile. 40 108 IPR000210 GO:0005515
Tsu07g04000 974 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 57 873 - -
Tsu07g04000 974 Gene3D Ribonuclease Inhibitor 449 563 IPR032675 -
Tsu07g04000 974 Pfam BTB/POZ domain 49 132 IPR000210 GO:0005515
Tsu07g04000 974 SUPERFAMILY RNI-like 686 913 - -
Tsu07g04000 974 Gene3D Ribonuclease Inhibitor 564 940 IPR032675 -
Tsu07g04000 974 SUPERFAMILY RNI-like 469 799 - -
Tsu07g04000 974 SUPERFAMILY POZ domain 47 133 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04000 Tsu-Chr7 46069331 46080673 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04000 - - gmx:100791594 1403.27