Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03999 ATGGCATCGGTATTGGCGGGGGATGAGGTGTCCATATCAACAAGCAGTCGTCGGAGTTGGACATCAACCAGTTTTAGAGACGTCTGGACGGCGACAGCCGCGGCCATTCCGGACGTATTCGAGCGGAGTGATAGGCACACACAAGAGGATGATGAGTACCACCTTACTTGGGCAGCCATTGAACGGTTGCCTACTTTTGAGCGTATGAGAAAAGGTGTAATGAAACATGTTGGTGAAAATGGAAAAGTTATGCATGATGAAGTTGATGTTGCTAAACTTTGTTTACATGACAAAAAGATTTTGTTGGATAGTATACTTAAGATTGTTGAAGAAGACAATGAGAAGTTTCTCAGAAAACTTAGAGACAGACAAGACAGGGTGGGGATTGAGATTCCAAAAATTGAAGTTCGTTATGAGAATTTATCTGTGGAGGGAGATGTGTATGTTGGAAGCAGAGCACTTCCAACACTGCTTAATGTTACATTCAATACTTTGGAGAGTGTTTTGGGATTGTTTCATCTTGCACCATCCAAGAAGAGAGAGATTCAGATTCTCAAACATGTTAGTGGAATTGTGAAACCATCAAGGATGACATTGCTTCTAGGTCCTCCAGGTTCTGGAAAAACAACATTTCTTCTAGCATTAGCAGGAAAACTTGATCATAATTTAAGGGCTTCTGGGAAAATCACTTATTGTGGTCATGAGCTAAATGAATTTGTTGCTACGAAAACTTGCGCTTATATTAGTCAACATGACATTCACTATGGAGAAATTACAGTGAGAGAGACATTGGATTTTTCATCGCGTTGTCTAGGTGTTGGTACTAGGTATGAATTGTTGATGGAACTCTCAAGAAGGGAGAGAGATGCAGGAATTAAACCAGATCCTGAGATTGATGCTTTCATGAAGGCTATAGCATTATCAGGCCAAAAAAGCAGTTTTGTTACTGATTATGTTCTCAAGATGCTTGGATTGGATATTTGTGCTGACATTATGGTTGGCGACGAAATGAGAAGGGGAATCTCAGGAGGACAAAAGAAGCGAGTAACAACAGGTTTTAATCTCACACTTTTGCATGCCATAGTTTCAGTTCCCTTCTCAACAATTTTTCAATATGTACTAATTGCTTTTGTTGTAGGGGAGATGCTAGTAGGACCAGCAAAAGCACTTTTTATGGATGAAATATCAACAGGATTGGATAGTTCTACAACTTTTCAAATATGCAAGTTCATGAGACAAATGGTTCATATAATGGATGTAACCGTCGTCATTTCACTTTTACAGCCAGCACCAGAGACATTTGAACTCTTTGACGACATTATTCTACTTTCGGAAGGACAAATTGTATACCAAGGACCACGTGAAAACGTGCTAGAGTTCTTCGAATACACAGGTTTTAGATGTCCGGATAGAAAAGGTGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGATCAACAACAATACTGGTTCAAAAAAGATCAACCTTACAGATATGTTTCAGTTTCTGAatttgttgattactttaattcatttcatattgGAGAGGAAATTGCGACGGAGCTTAAGGTTCCGTATAATAAGAGTCAAACTCATCCAGCTGCATTAGTGAAAGAAAAGTACGGCATTTCAAATTGGGAACTATTTAAGGCATGCTTTTCAAAAGAATGGCTTCTTATGAAGAGGAATgcttttatttatgtgttcaaAACAACACAGATAACAATCATGTCTATTATTACTTTTACTGTGTTCTTTAGAACAAAAATGTCGGTTGGTACCGTTCAAGATGGACAAAAATTCCATGGAGCATTATTCTTTACACTGATAAATGTGATGTTTAATGGGATGGCAGAACTATCCATGACAGTTACTAGGCTTCCTGTTTTCTACAAACAAAGGGATTTCAAGTTTTATCCTGCATGGGCGTTTGCGTTACCTATATGGATTCTTCGGATCCCTCTTTCCTTTTTGGAATCATTGATATGGATTGTTCTTACATATTTTACCATTGGTTTTGCTCCTTCTGCTAGCAGATTTTTTCGACAATTCTTGGCATTATTTGGCATTCATCAGATGGCTCTTTCTTTATTTCGGTTCGTCGCTGCAATTGGTAGATCACTAGTTATTGCTAATTCATTAGGTACCTTGACCTTGCTAGTGGTATTCGTGCTAGGAGGTTTCATTATTGCCAAAGACGACATCAAGCCATGGATGATATGGGGCTACTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATAACTGAATTCTTAGACAAACGGTGGAATATACCAAATACAGATACAAGATTTGATGCACCAACAATAGGAAAAGTACTTCTCAAATCTAGAGGCTTGTATACAGAAGATTATTGGTATTGGATCTGCCTTGGAGTCTTGGTTGGGTTTTCCCTTCTTTTCAACCTTCTCTTCATTCTTGCATTAACTTACTTGAATCCTTTAGTTGATTCAAAAGCAGTCACTGCGGATGAAGATGACAAGAAGAATGGAAATCCATCCTCTAGACACCTTCCCATTGAAGGTACCAACATATCAGTGAGAAATTCTTCAGAGTTTACTAGTCCATCGAATCATGAACCGAGAAGAGGAATGGTTCTACCGTTTCAACCTCTTTCAATGGCATTCAATCATATTAGCTACTTTGTAGACATGCCAGCAGAAATGAAGAGTCAAGGAATCAACAAGGATAGACTTCAACTGCTACAAAATGTTAGTGGTGCTTTTAGACCAGGCATATTAACAGCACTTGTAGGTGTTAGTGGTGCTGGAAAGACGACACTCATGGATGTACTAGCCGGAAGAAAAACGGGTGGATACATTGAAGGAAATATCAGCATATCAGGTTACCAAAAGAATCAAGCAACATTCGCTCGAATAAGTGGTTACTGTGAACAGAACGATATTCATTCTCCACATGTTACTGTCTATGAATCACTATTGTTTTCAGCATGGCTTCGTCTTCCTTCAGATGTAAAGCCGCAAACTCTAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTAGAGCTTAAACCACTTAGAGATGCTCTTGTCGGCCTTCCAGGTGTGGATGGTCTATCAACAGAACAAAGGAAAAGGCTTACGATCGCTGTGGAACTGGTTGCCAACCCTTCAATCATCTTCATGGATGAACCAACTTCAGGCCTTGATGCTAGAGCTGCTGCTATCGTTATGCGAACTGTGAGAAACACAGTAGACACGGGGAGAACTGTTGTTTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGGCAAGTCTAGAATCTCTAGACCTAAGACTATTCTTGATGAAAAGAGGAGGACAAGTTATCTACGCCGGACCTCTCGGTCGCCATTCACATAAGCTTGTAGAATATTTTGAAGCTATACCAGGAGTTCAAAAAATCAAGGATGGTTATAATCCAGCCACATGGATGCTTGAGGTCAGCTCTACTTCAGTTGAGGCTCAACTAGATGTAGATTTTGCAGAGATTTATGCCAACTCTACCCTTTACGAGAGGAATCAAGAACTTATTAAGGAGCTGAGTACTCCAGCACCGGATTCAAATGACTTGTACTTCCCGACCAAATATTCCCAATCATTTTTTGTTCAATGCAAAGCTAACTTCTGGAAACAGCATCTGTCCTATTGGAGACATTCTCAATATAATGCCGTCCGATTCTTCATGACTATAGTCATTGGAGTATTGTTTGGTCTAATATTCTGGAAGCAAGCAAAAAATACCAAAACACAACAAGGTTTACTGAATCTTTTGGGAGCCATGTACTCCGCGGTTCTCTTTCTTGGTGCAACAAATTGTACATCTGTGCAACCAGTTGTTTCCATTGCAAGAACAGTCTTCTATCGAGAAAGAGCAGCAGGGATGTATTCTGCATTACCCTATGCATTTGGTCAGGTGGCAGTTGAGACAATTTATAATGCAATTCAAACAGCCATATACACACTAATCCTTTATTCCATGATGGGATTTGAATGGAAAGCAACAAACTTCTTATGGTTCTATTACTACATACTAATGAGTTTTATCTACTTCACATTGTATGGAATGATGCTTGTTGCACTAACACCAGGTCACCATGTTGCCGGCATTTGTATGTCCTTTTTTCTGAGTTTTTGGAACTTGTTCTCCGGTTTCATCATTCCTAGGACGCAAATTCCTATATGGTGGAGATGGTACTATTGGGCTTCACCAGTTGCATGGACATTATATGGCCTTATAACCTCACAACTAGGGGACAAGAAAACAGAAATAATGATACCAGGAGCTAAAAGCATGGAACTGAAGGAATTCTTGGAACAAAATTTAGGTTATGATCATAATTTCCTTCCAGAAGTTGCTGTTGCTCATATAGGCTGGGTTCTTCTCTTTGCATTTGTGTTTGCCTTTGGCATCAAATTCTTGAACTTCCAGAAAAGATAG 4485 0.3895 MASVLAGDEVSISTSSRRSWTSTSFRDVWTATAAAIPDVFERSDRHTQEDDEYHLTWAAIERLPTFERMRKGVMKHVGENGKVMHDEVDVAKLCLHDKKILLDSILKIVEEDNEKFLRKLRDRQDRVGIEIPKIEVRYENLSVEGDVYVGSRALPTLLNVTFNTLESVLGLFHLAPSKKREIQILKHVSGIVKPSRMTLLLGPPGSGKTTFLLALAGKLDHNLRASGKITYCGHELNEFVATKTCAYISQHDIHYGEITVRETLDFSSRCLGVGTRYELLMELSRRERDAGIKPDPEIDAFMKAIALSGQKSSFVTDYVLKMLGLDICADIMVGDEMRRGISGGQKKRVTTGFNLTLLHAIVSVPFSTIFQYVLIAFVVGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTVVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEYTGFRCPDRKGVADFLQEVTSKKDQQQYWFKKDQPYRYVSVSEFVDYFNSFHIGEEIATELKVPYNKSQTHPAALVKEKYGISNWELFKACFSKEWLLMKRNAFIYVFKTTQITIMSIITFTVFFRTKMSVGTVQDGQKFHGALFFTLINVMFNGMAELSMTVTRLPVFYKQRDFKFYPAWAFALPIWILRIPLSFLESLIWIVLTYFTIGFAPSASRFFRQFLALFGIHQMALSLFRFVAAIGRSLVIANSLGTLTLLVVFVLGGFIIAKDDIKPWMIWGYYISPIMYGQNAIAITEFLDKRWNIPNTDTRFDAPTIGKVLLKSRGLYTEDYWYWICLGVLVGFSLLFNLLFILALTYLNPLVDSKAVTADEDDKKNGNPSSRHLPIEGTNISVRNSSEFTSPSNHEPRRGMVLPFQPLSMAFNHISYFVDMPAEMKSQGINKDRLQLLQNVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYQKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKPQTLKMFVEEVMELVELKPLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEASLESLDLRLFLMKRGGQVIYAGPLGRHSHKLVEYFEAIPGVQKIKDGYNPATWMLEVSSTSVEAQLDVDFAEIYANSTLYERNQELIKELSTPAPDSNDLYFPTKYSQSFFVQCKANFWKQHLSYWRHSQYNAVRFFMTIVIGVLFGLIFWKQAKNTKTQQGLLNLLGAMYSAVLFLGATNCTSVQPVVSIARTVFYRERAAGMYSALPYAFGQVAVETIYNAIQTAIYTLILYSMMGFEWKATNFLWFYYYILMSFIYFTLYGMMLVALTPGHHVAGICMSFFLSFWNLFSGFIIPRTQIPIWWRWYYWASPVAWTLYGLITSQLGDKKTEIMIPGAKSMELKEFLEQNLGYDHNFLPEVAVAHIGWVLLFAFVFAFGIKFLNFQKR 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03999 1494 Pfam Plant PDR ABC transporter associated 766 831 IPR013581 -
Tsu07g03999 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 470 IPR027417 -
Tsu07g03999 1494 Pfam ABC-transporter N-terminal 110 160 IPR029481 -
Tsu07g03999 1494 Gene3D - 171 505 IPR027417 -
Tsu07g03999 1494 Pfam ABC transporter 912 1064 IPR003439 GO:0005524
Tsu07g03999 1494 SMART AAA_5 921 1117 IPR003593 -
Tsu07g03999 1494 SMART AAA_5 194 447 IPR003593 -
Tsu07g03999 1494 Pfam ABC transporter 185 349 IPR003439 GO:0005524
Tsu07g03999 1494 Pfam ABC-2 type transporter 428 501 IPR043926 GO:0140359
Tsu07g03999 1494 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 20 353 - -
Tsu07g03999 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 470 IPR003439 GO:0005524
Tsu07g03999 1494 Gene3D - 898 1138 IPR027417 -
Tsu07g03999 1494 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 353 - -
Tsu07g03999 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 893 1145 IPR003439 GO:0005524
Tsu07g03999 1494 PANTHER ATP-BINDING CASSETTE TRANSPORTER 378 1494 - -
Tsu07g03999 1494 CDD ABCG_PDR_domain2 881 1128 IPR034003 -
Tsu07g03999 1494 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 378 1494 - -
Tsu07g03999 1494 Pfam ABC-2 type transporter 1219 1431 IPR013525 GO:0016020|GO:0140359
Tsu07g03999 1494 Pfam ABC-2 type transporter 549 761 IPR013525 GO:0016020|GO:0140359
Tsu07g03999 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 907 1097 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03999 Tsu-Chr7 46056161 46063261 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03999 K08711 - gmx:100786482 2425.2