Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03982 ATGAGAGGTATAACATCTTGTTACAATGAACATGCCATTAGAGTCTCTGATTTAtattgttcaagaccttcaaattcaaatcattcTTATCTTGTTCCAAAACTCAATAACCCTTCAACTCAAAATTCAGTTACAAACACATATAAACTCAATCATAAACAATTTCTCATAACACTAACTTGGACCAAGAAACTCATTGGTCAAGGTTTCATCATAAACATCACAAATAACAACACTTTTTCTGATTCTAATTCTGATTCTGTTTCTAGTTCTAGTTCTAGTTCTGATTCTGATTATGTTAATGTTATGTCAAAGtttgattcaaattcaaaccctCCTCTGTTTTTGATGAAAAACAGAGGAAATGaaacttttcaatttcaaaactttgaagttaaacTCTTATGGGATCTTTCTGAAGCTAAATATGAAGATGGACCTGAACCGGTTAATGGGTTTTACGTGATGGTTTTAGTGGATTCTGAATTGGGTCTTTTCCTTGGAGATAAAGAAGAAGAATCGTTGAAGAAAAATCATGGAGCAAAATTCTCAATGGTTTCAATGGTTTCAAGAAGTGAAAGATTTTCTGGTACTAATGTTTATGCAACAAAGGCAAAGTTTTGTGAAAGTGGAAATTTTCATGAGATATTGATAAAGTGTGGTGTTGAAGATGAAGGATCAAAGAGTAacgttttgtgtttgtttatggATAAGAAGATGGTGTTTAAAGTTAAGAGATTGAAGTGGAATTTTCGTGGGaatcaaacaatttttgtgGATGGTTTAGTTGTTGATTTGATGTGGGATTTGCATGATTGGATTTTCAATCCTAGTGATAGTCATCATAACAATAATAAGAACTATGATTCTGCGGTTTTTTTGTTTAGAACAAGGAGTGGTTTGGATAGTAGATTATGGTTGGAAGAGAAGAATTTGCAGAAGCAAAAGGAACAAGATAGAATTGGATTCTCTTTGTTGATATGTGGATGTCGTCCCAATGGTGTAAGAGGGGTGTCTTTGTGGTGGAGTGATGTCTCCTTACTAGGGACTCGTGTGGACTCGCACTCAGATTGGTTTTCTGAAGGAGTGACTAAGCGGATTGGCAATGGGACTTCGACTTCCTTTTGGTTTGACCCTTGGGTTGATGGTGTTCCTCTTCGGACTCGATATCAATCTCTCTTTCAAGCGTCTGACCAATGTCTTGACAGAGTCGCTGATATGGGTAGTTGGGTGACAGGAGAGTGGGAGTGGGAGCTTAGATGGAAAACGGATCTTGATATGCAGGACCAAGATCTTCTTAATGATTTGACGGAGTCCTTGCGTCAGGTGCGTTTTTCAACTACAGAAGACGAATGGTGTTGGAGGCATGAGCCAAGTGGGTTGTTTTCGGTTAAATCAGCCTATTTAGTTCTTGAAGATGGAGCTAGACTTCAAAGAACTCTCCCAGTGATTGACTTCGTAAATCTTGCTAGGGTTTGGGATTCTTGGGCCGCGTCCAAAGTGATTGTCTTTTCGTGGCAACTACTTCAGGATAGGGTTCTAACTCGGCAAAACCTTCGTAGGCGGAGGGTGATGGTAGGAGCTACTGATATTTCTTGTGTGTTTTGCGGAGCGGTTGAGGAGTCGGTAGATCacctttttgtttcttgtgatttgaTATCTCCTATTTGGTACCGTGTTTCTAGGTGGTTAGGGATCGAGTATGTGCCCCCCAATAGTATTATGCAagtttttgagagtttctttggGTTAGGTGTGGGGAGTCGGGTTCAATTAGGTTTGATTCTAGTATGGCATGCTGTTGTGTGGACTATCTGGACCTCCCGGAATGATATGATCTTTGTCGGTAAGTCTTCAACTGTTGATGATCTTATGGATATGGTGAAACTTTCCTCCTGGAAATGGTTTATAGGTAAAAACCCTGATAGCCCTTGCTCCCTCtacgagtgggaggtgcaacctataTTATGTTGGTCCAGTAAGACAAGGTGA 1992 0.3614 MRGITSCYNEHAIRVSDLYCSRPSNSNHSYLVPKLNNPSTQNSVTNTYKLNHKQFLITLTWTKKLIGQGFIINITNNNTFSDSNSDSVSSSSSSSDSDYVNVMSKFDSNSNPPLFLMKNRGNETFQFQNFEVKLLWDLSEAKYEDGPEPVNGFYVMVLVDSELGLFLGDKEEESLKKNHGAKFSMVSMVSRSERFSGTNVYATKAKFCESGNFHEILIKCGVEDEGSKSNVLCLFMDKKMVFKVKRLKWNFRGNQTIFVDGLVVDLMWDLHDWIFNPSDSHHNNNKNYDSAVFLFRTRSGLDSRLWLEEKNLQKQKEQDRIGFSLLICGCRPNGVRGVSLWWSDVSLLGTRVDSHSDWFSEGVTKRIGNGTSTSFWFDPWVDGVPLRTRYQSLFQASDQCLDRVADMGSWVTGEWEWELRWKTDLDMQDQDLLNDLTESLRQVRFSTTEDEWCWRHEPSGLFSVKSAYLVLEDGARLQRTLPVIDFVNLARVWDSWAASKVIVFSWQLLQDRVLTRQNLRRRRVMVGATDISCVFCGAVEESVDHLFVSCDLISPIWYRVSRWLGIEYVPPNSIMQVFESFFGLGVGSRVQLGLILVWHAVVWTIWTSRNDMIFVGKSSTVDDLMDMVKLSSWKWFIGKNPDSPCSLYEWEVQPILCWSSKTR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03982 663 Pfam Plant protein of unknown function (DUF868) 39 331 IPR008586 -
Tsu07g03982 663 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 331 - -
Tsu07g03982 663 Pfam zinc-binding in reverse transcriptase 462 557 IPR026960 -
Tsu07g03982 663 PANTHER EXPRESSED PROTEIN 1 331 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03982 Tsu-Chr7 45888170 45892478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03982 1 327 EF-hand Containing Proteins AT5G28150 30.909 1.17e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03982 - - pvu:PHAVU_001G186900g 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03982 07 45888170 45892478 Tsu07g03982 07 45888170 45892478 ECH