Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03981 ATGTCTGCAACTCAACACCTTCAATTAACAATCATCTTCATTCTATCTCTCTCAACAACATTAACATCATctttaacaacaacaacttcaATCCCACAACAACTTCTCAAAGGCTTTTCAACAGTTCCACTCTCATCACCTTCAACATCTTTTCAACCCATTCTCACAGACCCAACCGGTAATTTCTCACTTGGCTTCCTTCGTCAAAACCAAAACGATCTACAACTAGCCATCATTCACACACTTTCTTCTCAACCATTCTGGATCGCTAATCCAACTCAGTCCTTTTCTTGGTCACACACCACCCGTCTCTTCTTCAACGGCAGTCTTGTTTTGTCGGACCCACAAAGAACCCTCACATGGTCAACCGCCACAGACGGTGACCGTGTAGTTCTCTTCAACACCTCAAATTTACAAGTTCAAACAAAAAATGCTGCACCAATTTGGGAAAGTTTTCATTTTCCCACAAATACCCTTGTTCAGAATCAAAATTTCACTTCTAACATGTCCTTAGTTTCTTCTAACGGTCTTTATTCTTTAAGGTTAGGTGATACTTTCATGGGTTTATACGAAAACAACGGCGAGGAAAAAGGAAGGTCGTTATCAAAACGGTTATTTCTGTTATACTGGAAACGAACGGCGTTAGAAGCTAAAGCTTTAATAGTTAACGGTGAAGGACCCATTTATGCAAGAGTTAGTACAGAGGGTTATATTGGAATGTACCAAACTAGCCCTAAACCTGTTGATGTTCAGAAGTTTAATAGTTTTCAACAAACGTCGTCGTTTTTGTTGATCCGGTTAGAATCTGACGGAAATCTTAAAGGGTATTATTGGGATATAACAAAGTCTAGCTGGATTCTTAATTATCAAGCTATTACTGAAACTTGTGAGCTTCCTAATCCTTGTGGTTCTTATGGTTTGTGTACTCCTGGTGGGTCTTGTTCTTGTTTAGATAATCAAACCCGGTTCGAACCGGGAGAGTCGGGTGAACCGGGTGTTTGTTTTAATGATGATAGTGGTGGGGGTGTAGATGGAGGATTGTGCGGTGGTAATAATGGGATTGGTGGAGATAACGGTTACTATGTTTTGAGAACAAACGGCGTGGAGCCACCGCATAAGGAGTTATTAGAAGAAGTAACGACGTTATCTTTAACGGAATGTGAAAATTTGTGTGAGAAAGATTGTAGGTGTTGGGGAGCGTTGTATAATAATCAAACCGGGTTTTGTTATGTTTTGGATTATCCAATTGGGACAATGTTGGGAACAAGAGATGAGTCAAAGGTGGGTTATTTTAAGGTGAGGAAAGGTGCACGGAAGAGGAATAAGGTTGGGGTTATAATTGGAATTGTAGTTGGTCTTTTGCTTGGTGTTGTTGTTATTGGTATTGGAATTTGTGTAATGAggtggaaaaaaaagaaagggaaTCTAAAAGAGGTGGATAGAAATTGGGCTTCACCCGGCCCGTATAGGAATCTTGGATCCGAAAGTTTTAGATCCGTTGAGATGTCGGGTAGTAGtgcacaataa 1527 0.3903 MSATQHLQLTIIFILSLSTTLTSSLTTTTSIPQQLLKGFSTVPLSSPSTSFQPILTDPTGNFSLGFLRQNQNDLQLAIIHTLSSQPFWIANPTQSFSWSHTTRLFFNGSLVLSDPQRTLTWSTATDGDRVVLFNTSNLQVQTKNAAPIWESFHFPTNTLVQNQNFTSNMSLVSSNGLYSLRLGDTFMGLYENNGEEKGRSLSKRLFLLYWKRTALEAKALIVNGEGPIYARVSTEGYIGMYQTSPKPVDVQKFNSFQQTSSFLLIRLESDGNLKGYYWDITKSSWILNYQAITETCELPNPCGSYGLCTPGGSCSCLDNQTRFEPGESGEPGVCFNDDSGGGVDGGLCGGNNGIGGDNGYYVLRTNGVEPPHKELLEEVTTLSLTECENLCEKDCRCWGALYNNQTGFCYVLDYPIGTMLGTRDESKVGYFKVRKGARKRNKVGVIIGIVVGLLLGVVVIGIGICVMRWKKKKGNLKEVDRNWASPGPYRNLGSESFRSVEMSGSSAQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03981 508 PANTHER - 34 494 - -
Tsu07g03981 508 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 157 IPR036426 -
Tsu07g03981 508 PANTHER OS11G0149900 PROTEIN 34 494 - -
Tsu07g03981 508 ProSiteProfiles PAN/Apple domain profile. 348 435 IPR003609 -
Tsu07g03981 508 Pfam PAN domain 376 414 IPR003609 -
Tsu07g03981 508 Pfam S-locus glycoprotein domain 256 317 IPR000858 GO:0048544
Tsu07g03981 508 Gene3D - 48 153 IPR036426 -
Tsu07g03981 508 SMART ntp_6 357 436 IPR003609 -
Tsu07g03981 508 Pfam D-mannose binding lectin 87 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03981 Tsu-Chr7 45877290 45879486 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03981 - - cam:101498584 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03981 07 45877290 45879486 Tsu07g03981 07 45877290 45879486 ECH