Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03951 ATGGCGAGCGGTAGTAGTAGTAGAAAATCTCGAAGACGAAGAAGATCCGATGAATCTGCTTCAGAGTCGGATTCCGACCACCGCCGGAAAACTAGTCGCCGGTCACGGCGGGATTCAGATGATTCCAGTGATGACGATGATAGAAGTGGAAGAAAGAAGAAGTCTTCCAGAACAATCACAGAAGAGGAAATTTCACAGTACATGGCTAAAAAAGCTCAGAGAAAGGCTACAAAAGTTGCAAAAAAATTGAAGACTAATACTGTATCTGGTTATTCCAATGACTCTAATCCATTTGGTGATTCTAATCTCAATGAAAAGTTTGTTTGGCGCAAGAAGATTGAGCGGGATGTTACTCAAGGTGCATCTATTGATTCCTTTTCAGTTAAAGCTGAGAAGAAAAGACAAGTAGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCACTCGAGAAAGCACAGCATGAAGAAGAAATGGCATTATTAGCTAGGGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTTGATCAAAGCAAAGTTAGGTCAGAGATTAGATTGCGTGAAGGGCGTGCCAGGCCAATCGATGTCCTAACCAAGCACCTCAATGGATCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTTAAAGAAATGAGTGAGCTTCGTGACGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTTCTTGTGGTGTGCGATTGGGAGCTAGCTGAATCTCGAAAAAAGGATGCAATTGATCGAGCTAGGGTGCGTGGGGAAGAACCTCCTGCTGAGTTGCTTGCTGAGCAAAGGGGTCTACATTCGAGTGTTGAGCCAGATGTAAAGAACCTTTTACATGGAAAGACACGTACAGAGTTGGAAGACTTGCAGGCTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTCGAGTACTGGGAGGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAAATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAGCAACCATTGGAGGATGAAGATAAACCGGAGAGTTCTCAGGAAATGATACCTGAGGAAGCATATGTTGAGGATGATGCTAAAGTCCGTTCTGCAGATGAATCATTTTCACCAGAGCCTGTTAGAGAGGTTCAAGAAGCTGAAGACGAGGCTGGATCATTTTCACCACAACTGTTGCATGATGATGAAAATGAGGAAGCCATTGATCCTGAAGAGGACAAAGCTATACTGGAGCGGAAACGTATGGCTGTAATAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAACCAGCTCCACCTGAAGATAATTTAGAGATGAAAGCCTTTAAAGCTATGGGAGCTATGGAGGATGGAGATGCAGTGTTTGGATCTGGAGCTGAAGTGAGCCTTGATTCGCAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGTGTTCACACTGGATATGAGTGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGggtataaatttaatattttctatCCTGATCTTGTTGACAAGATAAAAGCCCCCAACTACACTATTGACAAGGATGGCAGCAATGGGGAAACTTGCATTATAAGATTCCATGCAGGGCCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAATGCACATTTGAACGTGGAATTCTACATGTGTACTTCAATTTCAAACGCCACCGTTACCGCCGATAA 1923 0.4285 MASGSSSRKSRRRRRSDESASESDSDHRRKTSRRSRRDSDDSSDDDDRSGRKKKSSRTITEEEISQYMAKKAQRKATKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGASIDSFSVKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKNLLHGKTRTELEDLQAHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDKPESSQEMIPEEAYVEDDAKVRSADESFSPEPVREVQEAEDEAGSFSPQLLHDDENEEAIDPEEDKAILERKRMAVIEEQQRRVQEAMASKPAPPEDNLEMKAFKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIDKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03951 640 MobiDBLite consensus disorder prediction 1 78 - -
Tsu07g03951 640 MobiDBLite consensus disorder prediction 377 433 - -
Tsu07g03951 640 Pfam Cactus-binding C-terminus of cactin protein 516 640 IPR019134 GO:0005515
Tsu07g03951 640 Coils Coil 140 176 - -
Tsu07g03951 640 SMART CactinC_cactus_3 516 640 - -
Tsu07g03951 640 PANTHER BNAC05G02180D PROTEIN 23 640 - -
Tsu07g03951 640 MobiDBLite consensus disorder prediction 11 60 - -
Tsu07g03951 640 Pfam Conserved mid region of cactin 168 365 IPR018816 -
Tsu07g03951 640 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 23 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03951 Tsu-Chr7 45602923 45609511 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03951 K25058 - gmx:100780087 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03951 07 45602923 45609511 Tsu07g03951 07 45602923 45609511 ECH