Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03949 ATGAAGCTCTTGGAAAAGGATTTTGCTCTAAATCAAAGAGGAAGTGTTAAAATAATTGCAGAAGAGCCCGATGATGTTTGGCTCCTTTACAACCTCATCACCATCGGCGATATCGTCACCGCCGATACCACACGAAAAATCCACTTCGGATCAAACAAAAACACTGCCTCACGTGTCAAACTCAATCTTCATCTCAAAGTCACGTGTTGCGACTTTCACAAAGACTCTTCTACTCTTCGCGTCCACGGTCGCAACCTTGAATCAAATCAATATGTTATCGCTGGCTCTTTCCATACTTTAACCCTTGAAATAAACAAACCATTTGACCTTCAAAAAAAGTTGTGGGGTCCAAATGCCGTCGAAACCTTAACCGATGCTAttgagaataataataattcttcTTCATCCCATGCCAATCTAGCCGTTGTTGTTATTCAACAACACCAAGCGGAGATTCACTTGCTTGGCAAAGGGGTCACAAATTGTTGCTCCAAGATCGAAGCGTCTTCACGTTCACATAAAAAATCTTCTTCCTCGTCTAACGTGTTTCTTCGTGATGTTTTTGAAGCTTTTGTGAAGCATGTGAATTTTAAAGTTGTGCAGAGTGTAGTGATAGCAGGGGATAACGCTGACAATGCAGCGCTATCGCCAACTACTTTTCATAGGTTTCTTTTATCAGAAGCAAAAAAGTCAAGAATGAGGTGTATTGAAGAAAACAAGTCACGTATCGTCGTTGTGGGATCAAAGTTTAATAATAAGGGTAATTGTGACTTTGACTTGAGGGGAGTTTTGAATGACATGGCAGTGATGAATTTGATAAAGGACAGCAATTTGGGCTTAGAGATTAGAACTTTCAAGGAATTGTGGGACATGGTATGTAACAATTCAGATCGTGTGTGTTATGGATCAAAACATGTGGAGAGTGCACAGGAGATGAAAGCAATTGAGACACTTTTAATAAGTGATGATTTATATAAGAATGAAGAGATTGAGACTAGGAAAAAATATGAGAGTTTGGTGAAATCAGTGAAGGAAGGTGGAGGAAAGGCAATGGTGTATTCTTCTATGCATGTTTCCTCATCACAATTGGCTCAATTAACTGGTGTTGCTGCCATTCTCAGATTTCCATTACCTGGTCTTCAAGATATGGATGATGATCATGTTTAG 1167 0.3916 MKLLEKDFALNQRGSVKIIAEEPDDVWLLYNLITIGDIVTADTTRKIHFGSNKNTASRVKLNLHLKVTCCDFHKDSSTLRVHGRNLESNQYVIAGSFHTLTLEINKPFDLQKKLWGPNAVETLTDAIENNNNSSSSHANLAVVVIQQHQAEIHLLGKGVTNCCSKIEASSRSHKKSSSSSNVFLRDVFEAFVKHVNFKVVQSVVIAGDNADNAALSPTTFHRFLLSEAKKSRMRCIEENKSRIVVVGSKFNNKGNCDFDLRGVLNDMAVMNLIKDSNLGLEIRTFKELWDMVCNNSDRVCYGSKHVESAQEMKAIETLLISDDLYKNEEIETRKKYESLVKSVKEGGGKAMVYSSMHVSSSQLAQLTGVAAILRFPLPGLQDMDDDHV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03949 388 Gene3D eRF1 domain 2 138 273 IPR042226 -
Tsu07g03949 388 Pfam eRF1 domain 3 282 377 IPR005142 -
Tsu07g03949 388 Gene3D Pelota, domain A 1 129 IPR038069 -
Tsu07g03949 388 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Tsu07g03949 388 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 384 - -
Tsu07g03949 388 SUPERFAMILY Translational machinery components 136 275 - -
Tsu07g03949 388 Pfam eRF1 domain 1 1 126 IPR005140 -
Tsu07g03949 388 Gene3D - 275 388 IPR029064 -
Tsu07g03949 388 PANTHER PELOTA 1 384 IPR004405 GO:0070481|GO:0070966|GO:0071025
Tsu07g03949 388 SUPERFAMILY L30e-like 281 381 IPR029064 -
Tsu07g03949 388 SMART eRF1_1_2 1 128 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03949 Tsu-Chr7 45579350 45580516 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03949 K06965 - gmx:100803618 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03949 07 45579350 45580516 Tsu07g03949 07 45579350 45580516 ECH