Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03945 ATGTTTCGATTCTGGGGATCACAAGAGCAACAATCGCAAGATGGTTCTTCATCACAGTCATGGTATCCACCATCTGTGATGAGTTCATCGAGTTCTTCAAGACCTGCTACACCTAGTTCATCTTCCGGTTCACCGAGACCTATGAATACTCATGTTCCGCCGGCAGAAGCTGCCGGAACTATAGCTTCTTTGAAGGATAAGAGTGTTGATGAGTTAAGGAAGCTTTTATCTGATAAAGATGCTTATCAACAGTTTCTAAATTCACTTGACCAGGTCAAGATTCAAACCAATCTGAAAGATGAACTTTCCAAGGAGAATATGCAGCTTGCAGAGGAGAATCTACAAAAGGAACCACGTATGATGGAACTTAGGAATCAGTGCAGAATAATCCGGACAACCGAATTAGCTACTGCTAATGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAGGAAATGTTGAAGTTAAATTCCCCTGCATCCCTTCTCCAAAGGATTCAAGAGTCTGTGAACCAGACAGATGAGGAATCTGAAAATCTGCACCAGCAACTCCTTGACAGAGAGATTGACCTTGCAGCATTTTTGCAGAAATACAAGAAGCTACGCACCACTTACCACAAGAAAACTCTTATACATCTTGCTGctaaaacatcaaatatatgA 660 0.4061 MFRFWGSQEQQSQDGSSSQSWYPPSVMSSSSSSRPATPSSSSGSPRPMNTHVPPAEAAGTIASLKDKSVDELRKLLSDKDAYQQFLNSLDQVKIQTNLKDELSKENMQLAEENLQKEPRMMELRNQCRIIRTTELATANEKLNELEKQKEEMLKLNSPASLLQRIQESVNQTDEESENLHQQLLDREIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03945 219 Pfam Modifier of rudimentary (Mod(r)) protein 65 209 IPR009851 -
Tsu07g03945 219 Gene3D Helix hairpin bin 141 212 IPR029012 -
Tsu07g03945 219 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 219 - -
Tsu07g03945 219 Coils Coil 162 182 - -
Tsu07g03945 219 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 219 - -
Tsu07g03945 219 MobiDBLite consensus disorder prediction 1 48 - -
Tsu07g03945 219 Coils Coil 92 112 - -
Tsu07g03945 219 MobiDBLite consensus disorder prediction 1 59 - -
Tsu07g03945 219 ProSiteProfiles VPS37 C-terminal domain profile. 139 219 IPR009851 -
Tsu07g03945 219 SUPERFAMILY Endosomal sorting complex assembly domain 158 207 IPR037202 -
Tsu07g03945 219 Coils Coil 135 155 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03945 K12185 - gmx:100305851 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03945 07 45561548 45565396 Tsu07g03945 07 45561548 45565396 ECH