Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03938 ATGGAGTCTCAAGCACCTCAACAACACTTTGTGTTATTTCCATTTATATCCCCAGGCCACATGCTTCCTATGATAGACCTTGCAAAAACATTAACACAACAAAACATCATCGTTACAATTGTCACAACTCCACACAACGCTTCACGTTTCTCACAAACATTTTCTGGTCACAAAATTCGTTTACTTCAACTTCAATTCCCATCTCAAGATGCAGGATTTCCAGAAGGTTGCGAGAATTTCGACATGCTTCCATCTATGTCCATGGCTTTCACTTTCTATTACGTAGCAAATAACCTTCTACAAGAACAAGCAGAAAAAGCTTTTGAAAATTTAACACCAAAACCAAATTGCATAATTTCTGATGTTGGTTTTCCTTACACTTCTCAAATTGCTACTAAATACAAAATTCCAAGAATTTCATTTTATGGTGTTAgttgtttttgtcttgtttggcatcaaaatttgataatttctaaTGTTATGGAGAAAATATCAACAGATTCTGAGTATTTTCTCATACCTGaaattcatcacaaaattgAGATCACGAAAGCACAAACGCCGTCATCAAATGATGGAAATTGGAAAGAATTTGTTGATAAAATGACTGCAGCTGAAATGGTTTCTTATGGTGTTGTGGTGAATTCTTTTGAAGAATTGGAACCAGAATATGTAAGTGATTTGAAGAAAACTAGGAATGGTAAAGTTTGGTGTGTCGGTCCTGTTTCGCTAAGAAACAAGAATCACTTAGATATGGCTCAAAGAGGGAACACTAAGGTTGCTACTTCAATTGTTGTTGAAAATTGCTTAAAGTGGCTCGATTCGCAAAATCCAAATTCggttatatatgtatgtttagGAAGTATGTGTAATTTAACTTCTTTGCAATTTATAGAGCTTGGTATGGCATTAGAAGCGTGTGAAAGACCGTTCATTTGGGTTATCAGGGAAAGAAATCAAACAGAAGAATTGAATAATTGGATCAAGGAATTGAGTTTTGAGGAAAGGACTAAGGAGAAAGGATTTTTGATAAAGGGTTGGGCTCCTCAAGTATTGATACTATCACATTGTTCGATTGGAGGATTCTTAACACACTGTGGTTGGAACTCGACGATAGAAGCAATATGTGCTGGTGTGCCAATGATTACATGGCCGTTGTTCGGTGACCAGTTTTTTAATGAGAGGTTTGTTGTGGAAATATTAAAGGTTGGCGTGATGGTTGGAGTGGAGAGTCCTTCAAATTGGGGGGAGGAAGAGAAGTTTGGTGTGTTGGTGAAGAAAGAAGATGTTGAGAGGGCTATAGAGAAGTTGATGGATGACAAGAATTATGAAAgtgaagagagaagaaaaagggCTAAAGAGCTTGCAGAGATGGCTAAGAGAGGTGTAGAAGAAGGAGGATCTTCTCACTTCAATGTCACTCAATTGATCCAAGATATCCTTCAACATTCAACCAAGTAG 1461 0.3498 MESQAPQQHFVLFPFISPGHMLPMIDLAKTLTQQNIIVTIVTTPHNASRFSQTFSGHKIRLLQLQFPSQDAGFPEGCENFDMLPSMSMAFTFYYVANNLLQEQAEKAFENLTPKPNCIISDVGFPYTSQIATKYKIPRISFYGVSCFCLVWHQNLIISNVMEKISTDSEYFLIPEIHHKIEITKAQTPSSNDGNWKEFVDKMTAAEMVSYGVVVNSFEELEPEYVSDLKKTRNGKVWCVGPVSLRNKNHLDMAQRGNTKVATSIVVENCLKWLDSQNPNSVIYVCLGSMCNLTSLQFIELGMALEACERPFIWVIRERNQTEELNNWIKELSFEERTKEKGFLIKGWAPQVLILSHCSIGGFLTHCGWNSTIEAICAGVPMITWPLFGDQFFNERFVVEILKVGVMVGVESPSNWGEEEKFGVLVKKEDVERAIEKLMDDKNYESEERRKRAKELAEMAKRGVEEGGSSHFNVTQLIQDILQHSTK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03938 486 Coils Coil 427 447 - -
Tsu07g03938 486 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Tsu07g03938 486 Gene3D Glycogen Phosphorylase B; 6 267 - -
Tsu07g03938 486 PANTHER GLYCOSYLTRANSFERASE 3 486 - -
Tsu07g03938 486 CDD GT1_Gtf-like 9 459 IPR002213 GO:0008194
Tsu07g03938 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 484 - -
Tsu07g03938 486 Gene3D Glycogen Phosphorylase B; 268 463 - -
Tsu07g03938 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 274 444 IPR002213 GO:0008194
Tsu07g03938 486 PANTHER GLYCOSYLTRANSFERASE 3 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03938 Tsu-Chr7 45496514 45498403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03938 6 482 Glycosyltransferase AT2G36750 53.593 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03938 K13496 K22771 gmx:112997714 711.449